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Structure of the wild-type Arabidopsis ABCB19 in the brassinolide and AMP-PNP bound state
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 8woo
Q-score: 0.401
Ying W, Wang Y, Wei H, Luo Y, Ma Q, Zhu H, Janssens H, Vukasinovic N, Kvasnica M, Winne JM, Gao Y, Tan S, Friml J, Liu X, Russinova E, Sun L
Science (2024) 383 pp. eadj4591-eadj4591 [ DOI: doi:10.1126/science.adj4591 Pubmed: 38513023 ]
- Purified wild-type abcb19 protein in complex with brassinolide and amp-pnp (Cellular component from Arabidopsis thaliana)
- Magnesium ion (24 Da, Ligand)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Abc transporter b family member 19 (136 kDa, Protein from Arabidopsis thaliana)
- Brassinolide (480 Da, Ligand)
Structure of the Arabidopsis E529Q/E1174Q ABCB19 in the ATP bound state
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8wp0
Q-score: 0.464
Ying W, Wang Y, Wei H, Luo Y, Ma Q, Zhu H, Janssens H, Vukasinovic N, Kvasnica M, Winne JM, Gao Y, Tan S, Friml J, Liu X, Russinova E, Sun L
Science (2024) 383 pp. eadj4591-eadj4591 [ DOI: doi:10.1126/science.adj4591 Pubmed: 38513023 ]
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Purified e529q/e1174q mutant abcb19 protein in complex with atp (Cellular component from Arabidopsis thaliana)
- Abc transporter b family member 19 (136 kDa, Protein from Arabidopsis thaliana)
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 8jma
Q-score: 0.637
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8x83
Q-score: 0.56
Ma D, Hu M, Yang X, Liu Q, Ye F, Cai W, Wang Y, Xu X, Chang S, Wang R, Yang W, Ye S, Su N, Fan M, Xu H, Guo J
Science (2024) 383 pp. eadj2609-eadj2609 [ Pubmed: 38305684 DOI: doi:10.1126/science.adj2609 ]
- Sodium ion (22 Da, Ligand)
- Gustatory receptor for sugar taste 43a (49 kDa, Protein from Drosophila melanogaster)
- Beta-d-fructofuranose (180 Da, Ligand)
- Gustatory receptor gr43a i418a (Cellular component from Drosophila melanogaster)
- Water (18 Da, Ligand)
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8x84
Q-score: 0.525
Ma D, Hu M, Yang X, Liu Q, Ye F, Cai W, Wang Y, Xu X, Chang S, Wang R, Yang W, Ye S, Su N, Fan M, Xu H, Guo J
Science (2024) 383 pp. eadj2609-eadj2609 [ Pubmed: 38305684 DOI: doi:10.1126/science.adj2609 ]
- Gustatory receptor for sugar taste 43a (49 kDa, Protein from Drosophila melanogaster)
- Gustatory receptor gr43a_i418a (Cellular component from Drosophila melanogaster)
- Beta-d-fructofuranose (180 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Water (18 Da, Ligand)
ACE2 -Targeting Monoclonal Antibody as Potent and Broad-Spectrum Coronavirus Blocker
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7v61
Q-score: 0.366
Chen Y, Zhang YN, Yan R, Wang G, Zhang Y, Zhang ZR, Li Y, Ou J, Chu W, Liang Z, Wang Y, Chen YL, Chen G, Wang Q, Zhou Q, Zhang B, Wang C
Signal Transduct Target Ther (2021) 6 pp. 315-315 [ DOI: doi:10.1038/s41392-021-00740-y Pubmed: 34433803 ]
- Ace2-b0at1 complex (Complex from Homo sapiens)
- Sodium-dependent neutral amino acid transporter b(0)at1 (73 kDa, Protein from Homo sapiens)
- Water (18 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- 3e8 (23 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- 3e8 (49 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Angiotensin-converting enzyme 2 (93 kDa, Protein from Homo sapiens)
Resolution: 3.25 Å
EM Method: Single-particle
Fitted PDBs: 7fjn
Q-score: 0.27
Liang Q, Wang Y, Zhang S, Sun J, Sun W, Li J, Liu Y, Li M, Cheng L, Jiang Y, Wang R, Zhang R, Yang Z, Ren Y, Chen P, Gao P, Yan H, Zhang Z, Zhang Q, Shi X, Wang J, Liu W, Wang X, Ying B, Zhao J, Qi H, Zhang L
iScience (2022) 25 pp. 104043-104043 [ DOI: doi:10.1016/j.isci.2022.104043 Pubmed: 35291264 ]
- S protein of south african (b.1.351) sars-cov-2 spike in complex with t6 fab (Complex from Severe acute respiratory syndrome coronavirus 2)
- T6 heavy chain (12 kDa, Protein from Homo sapiens)
- T6 fab (Complex)
- S protein of south african (b.1.351) sars-cov-2 (Complex from Homo sapiens)
- Spike glycoprotein,envelope glycoprotein (141 kDa, Protein from Human immunodeficiency virus 1)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- T6 light chain (12 kDa, Protein from Homo sapiens)
Resolution: 3.34 Å
EM Method: Single-particle
Fitted PDBs: 7fjo
Q-score: 0.106
Liang Q, Wang Y, Zhang S, Sun J, Sun W, Li J, Liu Y, Li M, Cheng L, Jiang Y, Wang R, Zhang R, Yang Z, Ren Y, Chen P, Gao P, Yan H, Zhang Z, Zhang Q, Shi X, Wang J, Liu W, Wang X, Ying B, Zhao J, Qi H, Zhang L
iScience (2022) 25 pp. 104043-104043 [ DOI: doi:10.1016/j.isci.2022.104043 Pubmed: 35291264 ]
- T6 light chain (24 kDa, Protein from Homo sapiens)
- S protein of south african (b.1.351) sars-cov-2 spike in complex with t6 fab (Complex from Homo sapiens)
- T6 heavy chain (23 kDa, Protein from Homo sapiens)
- T6 fab (Complex from Homo sapiens)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- S protein of south african (b.1.351) sars-cov-2 spike (Complex)
SARS-CoV-2 S trimer with one RBD in the open state and complexed with one H014 Fab.
Resolution: 3.55 Å
EM Method: Single-particle
Fitted PDBs: 7cac
Q-score: 0.327
Lv Z, Deng YQ, Ye Q, Cao L, Sun CY, Fan C, Huang W, Sun S, Sun Y, Zhu L, Chen Q, Wang N, Nie J, Cui Z, Zhu D, Shaw N, Li XF, Li Q, Xie L, Wang Y, Rao Z, Qin CF, Wang X
Science (2020) 369 pp. 1505-1509 [ Pubmed: 32703908 DOI: doi:10.1126/science.abc5881 ]
- Spike glycoprotein (133 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 spike glycoprotein complex with h014 fab (680 kDa, Complex from Severe acute respiratory syndrome coronavirus 2)
- Heavy chain of h014 fab (23 kDa, Protein from Homo sapiens)
- Light chain of h014 fab (23 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-2 spike glycoprotein (Complex from Homo sapiens)
- H014 fab (Complex)
Structural basis for neutralization of SARS-CoV-2 and SARS-CoV by a potent therapeutic antibody
Resolution: 3.52 Å
EM Method: Single-particle
Fitted PDBs: 7cab
Q-score: 0.476