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Introduction to metabolomics analysis

  • Overview
  • Search
  • Course content
  • Introduction to Metabolomics
  • Experimental design and quality control in metabolomics
  • Introduction to LC-MS platforms, data types and quality assessment of data
  • Data Reuse
  • Galaxy in Metabolomics
  • Keynote talk – Lipidomics
  • Methods and resources
    • Data pre-processing: lecture (XCMS) and practical (XCMS in Galaxy)
    • Functional analyses for biological interpretation: lecture and practical
    • MS data processing in mzmine
    • Statistical analysis (Data modelling)
    • Metabolite Identification
    • MetaboLights data and workflows: lecture and tutorial
    • Pathways with Reactome
    • Spatial single-cell metabolomics
  • Other Metabolomics materials
    • LC/GC-MS: Data acquisition and Data processing (MS1 and MSn)
    • WikiPathways
  • Trainer biographies
  • Further learning
  • Your feedback

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All materials are free cultural works licensed under a Creative Commons Attribution 4.0 International (CC BY 4.0) license, except where further licensing details are provided.

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Data Reuse

Trainer: Juan Antonio Vizcaino

Overview: A lecture focused on data reuse of public metabolomics data, to understand how one can get advantage of the huge amount of metabolomics data in the public domain.

Presentation

  • page navigation-left-circle-1_1 Keynote talk – Lipidomics
  • pageGalaxy in Metabolomics navigation-right-circle-1_1