Course content

These materials were part of the ‘Introduction to Metabolomics analysis’ 2026 course. Please refer to the course pages to check details about the live event and the original programme.

The contents table below outlines the different sessions that were included in the course, as well as the format of the materials (slides/videos/practicals) and each session’s trainer. Either proceed through the materials using the arrows at the end of each page or pick your topic of interest from the table below to skip straight to it.

 Presentation slides –  View or download the slides

 Recorded lectures – Watch the lecture videos 

 Practicals – View or download the slides, exercises, datasets, analysis scripts and results

FormatSubjectTrainer
Introduction to MetabolomicsNoemi Tejera Hernandez
Experimental design and quality control in metabolomics (2025 version)Lorraine Brennan
Introduction to LC-MS platforms, data types and quality assessment of dataWarwick Dunn
Galaxy in MetabolomicsMelanie Föll and Yann Guitton
Data ReuseJuan Antonio Vizcaino
Keynote talk – LipidomicsNils Hoffmann
Methods and resources
Statistical analysis (Data modelling)Goncalo Correia
Metabolite IdentificationElena Chekmeneva
MS data processing in mzmine Steffen Heuckeroth
Data pre-processing: lecture & practical (XCMS)Ibrahim Karaman
Functional analyses for biological interpretation: lecture and practicalChristina Schmidt and Denes Turei
MetaboLights data and workflows: lecture and tutorialThomas Payne, Noemi Tejera Hernandez and Ozgur Yurekten
Pathways with Reactome (2024 version)Krishna Kumar Tiwari
Spatial single-cell metabolomics (2024 version)Theodore Alexandrov
Other Metabolomics materials
LC/GC-MS: Data acquisition and Data processing (MS1 and MSn) (2023 version)Marynka Ulaszewska
WikiPathways (2023 version)Egon Willighagen