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Ligand clusters for UniProt code Q7ZA32

Ligand clusters for Q7ZA32: Pyranose 2-oxidase from Trametes ochracea

Top 6 (of 12) ligand clusters
Cluster 1.
10 ligand types
54 ligands
Cluster 2.
2 ligand types
11 ligands
Cluster 3.
2 ligand types
10 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
2 ligand types
3 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1tt0A  
JSmol
 

Structures

PDB   Schematic diagram
1tt0A    
3lskA    
4mokA    
4mopA    
4momA    
 more ...

 

 Cluster 1 contains 10 ligand types

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Ligand Description


 
1. Ligand: FAD × 22
flavin adenine dinucleotide
Flavin-Adenine dinucleotide
PDB codes: 1tt0(A), 2igk(A), 2igm(A), 2ign(A), 2igo(A), 3bg6(A), 3bg7(A), 3bly(A), 3fdy(A), 3k4b(A), 3k4c(A), 3k4j(A), 3k4k(A), 3k4l(A), 3k4m(A), 3k4n(A), 3lsh(A), 3lsi(A), 3lsk(A), 3pl8(A), 4mok(A), 4mol(A).


 
2. Ligand: FDA × 12
Dihydroflavine-Adenine dinucleotide
PDB codes: 4moe(A), 4mof(A), 4mog(A), 4moh(A), 4moi(A), 4moj(A), 4mom(A), 4moo(A), 4mop(A), 4moq(A), 4mor(A), 4mos(A).


 
3. Ligand: G3F × 4
3-Deoxy-3-Fluoro-Beta-D-Glucopyranose
PDB codes: 3pl8(A), 4moe(A), 4mog(A), 4moi(A).


 
4. Ligand: SHG × 4
2-Deoxy-2-Fluoro-Beta-D-Glucopyranose
PDB codes: 2igo(A), 3k4l(A), 3k4m(A), 4moh(A).


 
5. Ligand: 2H5 × 3
3-Deoxy-3-Fluoro-Beta-D-Galactopyranose
PDB codes: 4mom(A), 4mop(A), 4mor(A).


 
6. Ligand: 2FG × 2
2-Deoxy-2-Fluoro-Beta-D-Galactopyranose
PDB codes: 4mol(A), 4moq(A).


 
7. Ligand: ACT × 2
Acetate ion
PDB codes: 1tt0(A), 3lsk(A).


 
8. Ligand: G2F × 2
2-Deoxy-2-Fluoro-Alpha-D-Glucopyranose
PDB codes: 4mof(A), 4moj(A).


 
9. Ligand: GAF × 2
2-Deoxy-2-Fluoro-Alpha-D-Galactopyranose
PDB codes: 4moo(A), 4mos(A).


 
10. Ligand: SFD × 1
(S)-10-((2s,3s,4r)-5-((S)-((S)-(((2r,3s,4r,5r)-5-(6- Amino-9h-Purin-9-Yl)-3,4-Dihydroxy-
Tetrahydrofuran-2- Yl)methoxy)(hydroxy)phosphoryloxy)(hydroxy) phosphoryloxy)-2,3,4-
Trihydroxypentyl)-7,8-Dimethyl-2, 4-Dioxo-2,3,4,4a-Tetrahydrobenzo[g]pteridine-5(10h)-
Sulfonic acid
PDB code: 3lsm(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: 12P × 8
Dodecaethylene glycol
PDB codes: 1tt0(A), 3lsk(A), 3lsm(A), 4moe(A), 4mok(A), 4mol(A), 4mop(A), 4mor(A).


 
2. Ligand: 1PE × 3
Pentaethylene glycol
PDB codes: 3k4c(A), 4moj(A), 4mom(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: 12P × 7
Dodecaethylene glycol
PDB codes: 1tt0(A), 3lsk(A), 4moe(A), 4mok(A), 4mol(A), 4mop(A), 4mor(A).


 
2. Ligand: 1PE × 3
Pentaethylene glycol
PDB codes: 3k4c(A), 4moj(A), 4mom(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: 2FG × 1
2-Deoxy-2-Fluoro-Beta-D-Galactopyranose
PDB code: 4moq(A).


 
2. Ligand: MES × 1
2-(N-Morpholino)-Ethanesulfonic acid
PDB code: 4moj(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: SO3 × 2
Sulfite ion
PDB codes: 3lsm(A),


 
2. Ligand: 12P × 1
Dodecaethylene glycol
PDB code: 1tt0(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: 12P × 1
Dodecaethylene glycol
PDB code: 1tt0(A).

 

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