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Ligand clusters for UniProt code Q7ZA32
Ligand clusters for Q7ZA32: Pyranose 2-oxidase from Trametes ochracea
Top 6 (of 12) ligand clusters
Cluster 1.
10 ligand types
54 ligands
Cluster 2.
2 ligand types
11 ligands
Cluster 3.
2 ligand types
10 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
2 ligand types
3 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1tt0A
Structures
PDB
Schematic diagram
1tt0
A
3lsk
A
4mok
A
4mop
A
4mom
A
more ...
Cluster 1 contains 10 ligand types
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Ligand
Description
1. Ligand:
FAD × 22
flavin adenine dinucleotide
Flavin-Adenine dinucleotide
PDB codes:
1tt0
(A),
2igk
(A),
2igm
(A),
2ign
(A),
2igo
(A),
3bg6
(A),
3bg7
(A),
3bly
(A),
3fdy
(A),
3k4b
(A),
3k4c
(A),
3k4j
(A),
3k4k
(A),
3k4l
(A),
3k4m
(A),
3k4n
(A),
3lsh
(A),
3lsi
(A),
3lsk
(A),
3pl8
(A),
4mok
(A),
4mol
(A).
2. Ligand:
FDA × 12
Dihydroflavine-Adenine dinucleotide
PDB codes:
4moe
(A),
4mof
(A),
4mog
(A),
4moh
(A),
4moi
(A),
4moj
(A),
4mom
(A),
4moo
(A),
4mop
(A),
4moq
(A),
4mor
(A),
4mos
(A).
3. Ligand:
G3F × 4
3-Deoxy-3-Fluoro-Beta-D-Glucopyranose
PDB codes:
3pl8
(A),
4moe
(A),
4mog
(A),
4moi
(A).
4. Ligand:
SHG × 4
2-Deoxy-2-Fluoro-Beta-D-Glucopyranose
PDB codes:
2igo
(A),
3k4l
(A),
3k4m
(A),
4moh
(A).
5. Ligand:
2H5 × 3
3-Deoxy-3-Fluoro-Beta-D-Galactopyranose
PDB codes:
4mom
(A),
4mop
(A),
4mor
(A).
6. Ligand:
2FG × 2
2-Deoxy-2-Fluoro-Beta-D-Galactopyranose
PDB codes:
4mol
(A),
4moq
(A).
7. Ligand:
ACT × 2
Acetate ion
PDB codes:
1tt0
(A),
3lsk
(A).
8. Ligand:
G2F × 2
2-Deoxy-2-Fluoro-Alpha-D-Glucopyranose
PDB codes:
4mof
(A),
4moj
(A).
9. Ligand:
GAF × 2
2-Deoxy-2-Fluoro-Alpha-D-Galactopyranose
PDB codes:
4moo
(A),
4mos
(A).
10. Ligand:
SFD × 1
(S)-10-((2s,3s,4r)-5-((S)-((S)-(((2r,3s,4r,5r)-5-(6- Amino-9h-Purin-9-Yl)-3,4-Dihydroxy-
Tetrahydrofuran-2- Yl)methoxy)(hydroxy)phosphoryloxy)(hydroxy) phosphoryloxy)-2,3,4-
Trihydroxypentyl)-7,8-Dimethyl-2, 4-Dioxo-2,3,4,4a-Tetrahydrobenzo[g]pteridine-5(10h)-
Sulfonic acid
PDB code:
3lsm
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
12P × 8
Dodecaethylene glycol
PDB codes:
1tt0
(A),
3lsk
(A),
3lsm
(A),
4moe
(A),
4mok
(A),
4mol
(A),
4mop
(A),
4mor
(A).
2. Ligand:
1PE × 3
Pentaethylene glycol
PDB codes:
3k4c
(A),
4moj
(A),
4mom
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
12P × 7
Dodecaethylene glycol
PDB codes:
1tt0
(A),
3lsk
(A),
4moe
(A),
4mok
(A),
4mol
(A),
4mop
(A),
4mor
(A).
2. Ligand:
1PE × 3
Pentaethylene glycol
PDB codes:
3k4c
(A),
4moj
(A),
4mom
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
2FG × 1
2-Deoxy-2-Fluoro-Beta-D-Galactopyranose
PDB code:
4moq
(A).
2. Ligand:
MES × 1
2-(N-Morpholino)-Ethanesulfonic acid
PDB code:
4moj
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
SO3 × 2
Sulfite ion
PDB codes:
3lsm
(A),
2. Ligand:
12P × 1
Dodecaethylene glycol
PDB code:
1tt0
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
12P × 1
Dodecaethylene glycol
PDB code:
1tt0
(A).