Ligand clusters for UniProt code P00929

Ligand clusters for P00929: Tryptophan synthase alpha chain from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

		Top 6 (of 27) ligand clusters Cluster 1. 21 ligand types 60 ligands Cluster 2. 4 ligand types 4 ligands Cluster 3. 4 ligand types 8 ligands Cluster 4. 2 ligand types 3 ligands Cluster 5. 3 ligand types 6 ligands Cluster 6. 3 ligand types 3 ligands
Representative protein: 1k3uA

Structures

PDB		Schematic diagram
1k3uA
1cw2A
1tjpA
2cllA
1c8vA
		more ...

Cluster 1 contains 21 ligand types (of which only 20 are listed. Click for all)

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Ligand		Description
		1. Ligand: IGP × 5 Indole-3-Glycerol phosphate PDB codes: 1a5b(A), 1kfb(A), 1qoq(A), 2rh9(A), 2rhg(A).
		2. Ligand: G3H × 1 Glyceraldehyde-3-Phosphate PDB code: 2clk(A).
		3. Ligand: DMS × 3 dimethyl sulfoxide Dimethyl sulfoxide PDB codes: 4zqc(A), 6dz4(A), 6wdu(A).
		4. Ligand: IPL × 4 Indole-3-Propanol phosphate PDB codes: 1beu(A), 1kfc(A), 1qop(A), 2trs(A).
		5. Ligand: FIP × 3 5-Fluoroindole propanol phosphate PDB codes: 1a50(A), 1a5s(A), 1fuy(A).
		6. Ligand: G3P × 3 Sn-Glycerol-3-Phosphate PDB codes: 1wbj(A), 2j9x(A), 2tsy(A).
		7. Ligand: 13P × 1 1,3-Dihydroxyacetonephosphate PDB code: 1k8y(A).
		8. Ligand: IAG × 2 N-[1h-Indol-3-Yl-Acetyl]glycine acid PDB codes: 1k7e(A), 1k8z(A).
		9. Ligand: IAV × 1 N-[1h-Indol-3-Yl-Acetyl]valine acid PDB code: 1k7f(A).
		10. Ligand: IAD × 1 N-[1h-Indol-3-Yl-Acetyl]aspartic acid PDB code: 1k3u(A).
		11. Ligand: HPF × 1 1-[(2-Hydroxylphenyl)amino]3-Glycerolphosphate PDB code: 1tjp(A).
		12. Ligand: F19 × 2 2-[(2-Naphthylsulfonyl)amino]ethyl dihydrogen phosphate PDB codes: 2clh(A), 2clo(A).
		13. Ligand: HE1 × 2 4-(2-Hydroxyphenylthio)-1-Butenylphosphonic acid PDB codes: 1c29(A), 1c8v(A).
		14. Ligand: NHP × 1 4-(2-Aminophenylthio)-Butylphosphonic acid PDB code: 1cx9(A).
		15. Ligand: HF1 × 1 4-(2-Hydroxy-4-Fluorophenylthio)-Butylphosphonic acid PDB code: 1c9d(A).
		16. Ligand: HSP × 1 4-(2-Hydroxyphenylsulfinyl)-Butylphosphonic acid PDB code: 1cw2(A).
		17. Ligand: F6F × 3 2-{[4-(Trifluoromethoxy)benzoyl]amino}ethyl dihydrogen phosphate PDB codes: 2cle(A), 2clf(A), 2clm(A).
		18. Ligand: F9F × 16 2-({[4-(Trifluoromethoxy)phenyl]sulfonyl} amino)ethyl dihydrogen phosphate PDB codes: 2cli(A), 2cll(A), 3pr2(A), 4hn4(A), 4hpj(A), 4hpx(A), 4ht3(A), 4xug(A), 5cgq(A), 6c73(A), 6d0v(A), 6duc(A), 6dzo(A), 6o1h(A), 6vnt(A), 6xe3(A).
		19. Ligand: F6F × 7 2-{[4-(Trifluoromethoxy)benzoyl]amino}ethyl dihydrogen phosphate PDB codes: 4kkx(A), 4wx2(A), 4y6g(A), 4zqc(A), 5bw6(A).
		20. Ligand: BZI × 1 Benzimidazole PDB code: 6x0c(A).
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Cluster 2 contains 4 ligand types

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Ligand		Description
		1. Ligand: DMS × 1 dimethyl sulfoxide Dimethyl sulfoxide PDB code: 6wdu(A).
		2. Ligand: EDO × 1 1,2-Ethanediol PDB code: 6c73(A).
		3. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 6c73(A).
		4. Ligand: PGE × 1 Triethylene glycol PDB code: 4ht3(A).

Cluster 3 contains 4 ligand types

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Ligand		Description
		1. Ligand: DMS × 4 dimethyl sulfoxide Dimethyl sulfoxide PDB codes: 2j9x(A), 6d0v(A), 6duc(A), 6o1h(A).
		2. Ligand: SO4 × 2 Sulfate ion PDB codes: 6oso(A), 6ouy(A).
		3. Ligand: EDO × 1 1,2-Ethanediol PDB code: 6d0v(A).
		4. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 4kkx(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: SO4 × 2 Sulfate ion PDB codes: 6oso(A), 6ouy(A).
		2. Ligand: BCN × 1 Bicine PDB code: 4ht3(A).

Cluster 5 contains 3 ligand types

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Ligand		Description
		1. Ligand: DMS × 4 dimethyl sulfoxide Dimethyl sulfoxide PDB codes: 4zqc(A), 6c73(A), 6dz4(A), 6xe3(A).
		2. Ligand: EDO × 1 1,2-Ethanediol PDB code: 6vnt(A).
		3. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 4kkx(A).

Cluster 6 contains 3 ligand types

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Ligand		Description
		1. Ligand: PG5 × 1 1-Methoxy-2-[2-(2-Methoxy-Ethoxy]-Ethane PDB code: 4ht3(A).
_Cl		2. Metal: _CL × 1 PDB code: 6duc(A).
_Cs		3. Metal: _CS × 1 PDB code: 6c73(A).