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List of PDB entries containing Het Group DAL

Het Group: DAL
 
PDB code:
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Name: D-Alanine
Formula: C3H7NO2
Compound type: D-Peptide linking
CAS Registry Number: 338-69-2
The following 418 PDB entries (on 5 separate pages) contain the Het Group DAL. The count column shows its number of occurrence in the structure.

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PDB id Count Name Method Date
148l   ×0   A covalent enzyme-substrate intermediate with saccharide distortion in a mutant t4 lysozyme   X-ray(1.9Å)   30-Apr-94
1aj1   ×0   Nmr structure of the lantibiotic actagardine   NMR(15 models)   15-Oct-97
1bck   ×0   Human cyclophilin a complexed with 2-thr cyclosporin   X-ray(1.8Å)   16-Sep-98
1bfw   ×0   Retro-inverso analogue of the g-h loop of vp1 in foot-and-mouth- disease (fmd) virus, nmr, 10 structures   NMR(10 models)   13-Jan-99
1bzv   ×0   [D-alab26]-des(b27-b30)-insulin-b26-amide a superpotent single- replacement insulin analogue, nmr, minimized average structure   NMR(1 model)   18-May-99
1c0p   ×0   D-amino acic oxidase in complex with d-alanine and a partially occupied biatomic species   X-ray(1.2Å)   22-Nov-00
1c4b   ×0   A beta-hairpin mimic from fceri-alpha-cyclo(rd-262)   NMR(15 models)   25-Aug-99
1c5f   ×7   Crystal structure of the cyclophilin-like domain from brugia malayi complexed with cyclosporin a   X-ray(2.47Å)   03-Dec-99
1csa   ×0   The mutant e.Coli f112w cyclophilin binds cyclosporin a in nearly identical conformation as human cyclophilin   NMR(18 models)   30-Apr-94
1cwa   ×0   X-ray structure of a monomeric cyclophilin a-cyclosporin a crystal complex at 2.1 angstroms resolution   X-ray(2.1Å)   29-Jan-96
1cwb   ×0   The x-ray structure of (mebm2t)1-cyclosporin complexed with cyclophilin a provides an explanation for its anomalously high immunosuppressive activity   X-ray(2.2Å)   29-Jan-96
1cwc   ×0   Improved binding affinity for cyclophilin a by a cyclosporin derivative singly modified at its effector domain   X-ray(1.86Å)   29-Jan-96
1cwf   ×0   Human cyclophilin a complexed with 2-val cyclosporin   X-ray(1.86Å)   15-Jul-98
1cwh   ×0   Human cyclophilin a complexed with 3-d-ser cyclosporin   X-ray(1.86Å)   15-Jul-98
1cwi   ×0   Human cyclophilin a complexed with 2-val 3-(n-methyl)-d-alanine cyclosporin   X-ray(1.9Å)   12-Aug-98
1cwj   ×0   Human cyclophilin a complexed with 2-val 3-s-methyl-sarcosine cyclosporin   X-ray(1.8Å)   26-Aug-98
1cwk   ×0   Human cyclophilin a complexed with 1-(6,7-dihydro)mebmt 2-val 3-d-(2- s-methyl)sarcosine cyclosporin   X-ray(1.8Å)   15-Jul-98
1cwl   ×0   Human cyclophilin a complexed with 4 4-hydroxy-meleu cyclosporin   X-ray(1.8Å)   15-Jul-98
1cwm   ×0   Human cyclophilin a complexed with 4 meile cyclosporin   X-ray(2Å)   15-Jul-98
1cya   ×0   Nmr studies of (u-13c)cyclosporin a bound to cyclophilin: bound conformation and portions of cyclosporin involved in binding   NMR(1 model)   31-Jan-94
1cyb   ×0   Nmr studies of (u-13c)cyclosporin a bound to cyclophilin: bound conformation and portions of cyclosporin involved in binding   NMR(20 models)   31-Jan-94
1czq   ×0   Crystal structure of the d10-p1/iqn17 complex: a d-peptide inhibitor of HIV-1 entry bound to the gp41 coiled-coil pocket.   X-ray(1.5Å)   13-Oct-99
1dsr   ×0   Peptide antibiotic, nmr, 6 structures   NMR(6 models)   12-Feb-97
1eva   ×0   Nmr structure of cyanobacterial toxin, phosphatase-1/-2a inhibitor   NMR(46 models)   08-Nov-96
1evb   ×0   Nmr structure of cyanobacterial toxin, phosphatase-1/-2a inhibitor   NMR(1 model)   08-Nov-96
1fjm   ×1   Protein serine/threonine phosphatase-1 (alpha isoform, type 1) complexed with microcystin-lr toxin   X-ray(2.1Å)   20-Jun-96
1fvm   ×10   Complex of vancomycin with di-acetyl-lys-d-ala-d-ala   X-ray(1.8Å)   01-Nov-00
1gac   ×2   Nmr structure of asymmetric homodimer of a82846b, a glycopeptide antibiotic, complexed with its cell wall pentapeptide fragment   NMR(80 models)   17-Aug-96
1go6   ×6   Balhimycin in complex with lys-d-ala-d-ala   X-ray(0.98Å)   13-Jun-02
1h0i   ×1   Complex of a chitinase with the natural product cyclopentapeptide argifin from gliocladium   X-ray(2Å)   27-Jun-02
1hhu   ×6   Balhimycin in complex with d-ala-d-ala   X-ray(0.89Å)   05-Sep-03
1hhy   ×2   Deglucobalhimycin in complex with d-ala-d-ala   X-ray(0.89Å)   05-Sep-03
1hhz   ×5   Deglucobalhimycin in complex with cell wall pentapeptide   X-ray(0.99Å)   05-Sep-03
1ic9   ×0   Nmr solution structure of the designed beta-sheet mini-protein th10aox   NMR(30 models)   11-Apr-01
1icl   ×0   Solution structure of designed beta-sheet mini-protein th1ox   NMR(38 models)   11-Apr-01
1ico   ×0   Solution structure of designed beta-sheet mini-protein th10box   NMR(42 models)   11-Apr-01
1ikf   ×0   A conformation of cyclosporin a in aqueous environment revealed by the x-ray structure of a cyclosporin-fab complex   X-ray(2.5Å)   31-Mar-95
1iki   ×0   Complex of streptomyces r61 dd-peptidase with the products of a specific peptidoglycan substrate fragment   X-ray(1.25Å)   11-Sep-02
1kto   ×0   Thermolysin complexed with z-d-alanine (benzyloxycarbonyl-d-alanine)   X-ray(1.9Å)   17-Jan-03
1lcm   ×0   Nmr minimized average structure of microcystin-lr   NMR(1 model)   07-Dec-96
1loc   ×3   Interaction of a legume lectin with two components of the bacterial cell wall   X-ray(2.05Å)   30-Apr-94
1m63   ×1   Crystal structure of calcineurin-cyclophilin-cyclosporin shows common but distinct recognition of immunophilin-drug complexes   X-ray(2.8Å)   25-Sep-02
1mf8   ×0   Crystal structure of human calcineurin complexed with cyclosporin a and human cyclophilin   X-ray(3.1Å)   16-Oct-02
1mik   ×0   The role of water molecules in the structure-based design of (5- hydroxynorvaline)-2-cyclosporin: synthesis, biological activity, and crystallographic analysis with cyclophilin a   X-ray(1.76Å)   08-Mar-96
1p4n   ×0   Crystal structure of weissella viridescens femx:udp-murnac- pentapeptide complex   X-ray(1.9Å)   10-Feb-04
1pek   ×0   Structure of the complex of proteinase k with a substrate-analogue hexa-peptide inhibitor at 2.2 angstroms resolution   X-ray(2.2Å)   31-Jan-94
1qng   ×0   Plasmodium falciparum cyclophilin complexed with cyclosporin a   X-ray(2.1Å)   13-Oct-00
1qnh   ×1   Plasmodium falciparum cyclophilin (double mutant) complexed with cyclosporin a   X-ray(2.1Å)   13-Oct-00
1qte   ×0   Crystal structure of the 70 kda soluble lytic transglycosylase slt70 from escherichia coli at 1.90 a resolution in complex with a 1,6- anhydromurotripeptide   X-ray(1.9Å)   31-Aug-99
1qtl   ×7   Crystal structure of the cyclophilin-like domain from brugia malayi complexed with cyclosporin a   X-ray(2.47Å)   02-Jul-99
1sn9   ×3   An oligomeric domain-swapped beta-beta-alpha mini-protein   X-ray(1.2Å)   17-Aug-04
1sna   ×3   An oligomeric domain-swapped beta-beta-alpha mini-protein   X-ray(1.5Å)   17-Aug-04
1sne   ×1   An oligomeric domain-swapped beta-beta-alpha mini-protein   X-ray(1.5Å)   17-Aug-04
1t5m   ×0   Structural transitions as determinants of the action of the calcium- dependent antibiotic daptomycin   NMR(15 models)   31-Aug-04
1t5n   ×0   Structural transitions as determinants of calcium-dependent antibiotic daptomycin   NMR(17 models)   31-Aug-04
1t7d   ×1   Crystal structure of escherichia coli type i signal peptidase in complex with a lipopeptide inhibitor   X-ray(2.47Å)   13-Jul-04
1uzt   ×0   The pyrophosphate cage: the structure of the nisin/lipid ii complex provides a blueprint for novel antibiotics   NMR(20 models)   09-Sep-04
1vbs   ×0   Structure of cyclophilin complexed with (d)ala containing tetrapeptide   X-ray(2Å)   13-Jan-99
1w9n   ×0   Isolation and characterization of epilancin 15x, a novel antibiotic from a clinical strain of staphylococcus epidermidis   NMR(20 models)   01-Apr-05
1w9v   ×1   Specificity and affinity of natural product cyclopentapeptide argifin against aspergillus fumigatus   X-ray(2Å)   10-Jan-05
1wb0   ×0   Specificity and affinity of natural product cyclopentapeptide inhibitor argifin against human chitinase   X-ray(1.65Å)   28-Jan-05
1wco   ×2   The solution structure of the nisin-lipid ii complex   NMR(20 models)   07-Mar-05
1xof   ×1   Heterooligomeric beta beta alpha miniprotein   X-ray(1.95Å)   01-Feb-05
1xq7   ×2   Cyclophilin from trypanosoma cruzi bound to cyclosporin a   X-ray(2.07Å)   21-Dec-04
1xt7   ×0   Daptomycin nmr structure   NMR(1 model)   16-Nov-04
1zmh   ×3   Crystal structure of human neutrophil peptide 2, hnp-2 (variant gly16- > d-ala)   X-ray(1.5Å)   16-Aug-05
1zmi   ×3   Crystal structure of human alpha_defensin-2 (variant gly16->d-ala), p 32 2 1 space group )   X-ray(1.15Å)   16-Aug-05
1zmk   ×1   Crystal structure of human alpha-defensin-2 (variant gly16-> d-ala), p 42 21 2 space group   X-ray(1.3Å)   16-Aug-05
2aiz   ×0   Solution structure of peptidoglycan associated lipoprotein from haemophilus influenza bound to udp-n-acetylmuramoyl-l-alanyl-d- glutamyl-meso-2,6-diaminopimeloyl-d-alanyl-d-alanine   NMR(20 models)   14-Mar-06
2aph   ×2   Crystal structure of human pgrp-ialphac in complex with muramyl pentapeptide   X-ray(2.1Å)   27-Jun-06
2bdx   ×0   X-ray crystal structure of dihydromicrocystin-la bound to protein phosphatase-1   X-ray(2.3Å)   17-Jan-06
2dde   ×0   Structure of cinnamycin complexed with lysophosphatidylethanolamine   NMR(10 models)   21-Feb-06
2eax   ×0   Crystal structure of human pgrp-ibetac in complex with glycosamyl muramyl pentapeptide   X-ray(2.1Å)   02-Oct-07
2esl   ×5   Human cyclophilin c in complex with cyclosporin a   X-ray(1.9Å)   13-Dec-05
2gyp   ×1   Diabetes mellitus due to a frustrated schellman motif in hnf-1a   X-ray(1.4Å)   20-Mar-07
2hvf   ×0   Crystal structure of n-terminal domain of ribosomal protein l9 (ntl9), g34da   X-ray(1.57Å)   12-Jun-07
2iae   ×1   Crystal structure of a protein phosphatase 2a (pp2a) holoenzyme.   X-ray(3.5Å)   26-Dec-06
2ie3   ×0   Structure of the protein phosphatase 2a core enzyme bound to tumor- inducing toxins   X-ray(2.8Å)   07-Nov-06
2ih1   ×0   Ion selectivity in a semi-synthetic k+ channel locked in the conductive conformation   X-ray(2.4Å)   21-Nov-06
2ih3   ×0   Ion selectivity in a semi-synthetic k+ channel locked in the conductive conformation   X-ray(1.72Å)   21-Nov-06
2j9p   ×1   Crystal structure of the bacillus subtilis pbp4a, and its complex with a peptidoglycan mimetic peptide.   X-ray(2.8Å)   03-Jul-07
2k9r   ×0   Enhancing the activity of insulin by stereospecific unfolding   NMR(20 models)   11-Nov-08
2kqq   ×0   Nmr structure of human insulin mutant gly-b8-d-ala, his-b10-asp, pro- b28-lys, lys-b29-pro, 20 structures   NMR(20 models)   24-Nov-10
2ktn   ×0   Spatial structure of lch-alpha peptide from two-component lantibiotic system lichenicidin vk21   NMR(20 models)   21-Jul-10
2kto   ×0   Spatial structure of lch-beta peptide from two-component lantibiotic lichenicidin vk21   NMR(20 models)   21-Jul-10
2l1y   ×0   Nmr structure of human insulin mutant gly-b20-d-ala, gly-b23-d-ala pro-b28-lys, lys-b29-pro, 20 structures   NMR(20 models)   31-Aug-11
2loc   ×0   Conotoxin analogue [d-ala2]buiiib   NMR(20 models)   23-Jan-13
2m7c   ×0   Circular permutation of the trp-cage: fold rescue upon addition of a hydrophobic staple   NMR(32 models)   25-Dec-13
2m7d   ×0   Trp-cage 16b p12w: a hyperstable miniprotein   NMR(30 models)   25-Dec-13
2mh5   ×0   Structure and nmr assignments of lantibiotic nai-107 in dpc micelles   NMR(20 models)   05-Mar-14
2mj9   ×0   Designed exendin-4 analogues   NMR(10 models)   04-Jun-14
2mtz   ×5   Haddock model of bacillus subtilis l,d-transpeptidase in complex with a peptidoglycan hexamuropeptide   NMR(5 models)   14-Jan-15
2nbl   ×0   Peptide model of 4-stranded beta-arch   NMR(10 models)   08-Mar-17
2npp   ×1   Structure of the protein phosphatase 2a holoenzyme   X-ray(3.3Å)   12-Dec-06
2nyl   ×1   Crystal structure of protein phosphatase 2a (pp2a) holoenzyme with the catalytic subunit carboxyl terminus truncated   X-ray(3.8Å)   12-Dec-06
2nym   ×1   Crystal structure of protein phosphatase 2a (pp2a) with c-terminus truncated catalytic subunit   X-ray(3.6Å)   12-Dec-06
2oju   ×1   X-ray structure of complex of human cyclophilin j with cyclosporin a   X-ray(2.4Å)   22-Jan-08
2poy   ×2   Cryptosporidium parvum cyclophilin type peptidyl-prolyl cis-trans isomerase cgd2_4120 in complex with cyclosporin a   X-ray(1.8Å)   08-May-07
2q33   ×1   Crystal structure of all-d monellin at 1.8 a resolution   X-ray(1.8Å)   13-Nov-07
2q3i   ×0   Crystal structure of the d10-p3/iqn17 complex: a d-peptide inhibitor of HIV-1 entry bound to the gp41 coiled-coil pocket   X-ray(1.5Å)   12-Jun-07

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