ArrayExpress Collection
Sequencing-based spatial transcriptomics studies and metadata.
Access spatial transcriptomics data
ST data is discoverable in existing EMBL-EBI resources. Choose the route that matches your modality and analysis needs. Each resource provides its own filters, metadata schema, and download options. Use their in-site documentation to refine search and access strategies.
Access routes
BioImage Archive
Imaging-based spatial molecular data and associated files.
Spatial Omics Gallery
Curated spatial omics datasets with imaging and metadata context.