Structure for E64 (C01.001 inhibitor)

Summary Structure Literature

 

PDB Organism Resolution Comment
1AEC Actinidia deliciosa 1.86 Å complex with E64
Catalytic residues are shown in ball-and-stick representation: Cys151 in yellow, His288 in purple and Asn308 in pink. E-64 is shown in grey in ball-and-stick representation.
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1ATK Homo sapiens 2.20 Å complex with E64
Catalytic residues are shown in ball-and-stick representation: Cys133 in yellow, His276 in purple and Asn296 in pink. E-64 is shown in grey in ball-and-stick representation.
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1CV8 Staphylococcus aureus 1.75 Å complex with E64
Catalytic residues are shown in ball-and-stick representation: Cys24 in yellow, His120 in purple and Asn141 in pink. E-64 is shown in grey in ball-and-stick representation.
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1MEG Carica papaya 2.00 Å Asp185Glu mutant; complex with E64
Catalytic residues are shown in ball-and-stick representation: Cys157 in yellow, His291 in purple and Asn311 in pink.
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3BCN Tabernaemontana divaricata 2.85 Å complex with E64
Catalytic residues are shown in ball-and-stick representation: Gln8 in light pink, Cys14 in yellow, His157 in purple and Asn173 in dark pink. The bound inhibitor E64 is shown in grey ball-and-stick representation.
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TERTIARY STRUCTURE DATA
Comment Resolution PDB PDBe SCOP CATH PDBSum Proteopedia Reference
actinidin ( Actinidia deliciosa)
complex with E64 1.86 Å 1AEC 1AEC 1AEC 1AEC 1AEC 1AEC Varughese et al., 1992
ananain ( Ananas comosus)
complex with E-64 1.98 Å 6MIS 6MIS 6MIS 6MIS 6MIS 6MIS
caricain ( Carica papaya)
Asp185Glu mutant; complex with E64 2.00 Å 1MEG 1MEG 1MEG 1MEG 1MEG 1MEG Katerelos et al., 1996
cathepsin K ( Homo sapiens)
complex with E64 2.20 Å 1ATK 1ATK 1ATK 1ATK 1ATK 1ATK Zhao et al., 1997
calpain-3 ( Homo sapiens)
protease core; complex with E-64 2.80 Å 6BJD 6BJD 6BJD 6BJD 6BJD 6BJD
falcipain-2 ( Plasmodium falciparum)
complex with E64 2.90 Å 3BPF 3BPF 3BPF 3BPF 3BPF 3BPF Kerr et al., 2009
family C100 unassigned peptidases ( Polyporus squamosus)
complex with E64 1.49 Å 5MUA 5MUA 5MUA 5MUA 5MUA 5MUA
calpain-1 ( Rattus norvegicus)
peptidase unit only; complex with E64 1.90 Å 1TLO 1TLO 1TLO 1TLO 1TLO 1TLO Moldoveanu et al., 2004
staphopain A ( Staphylococcus aureus)
complex with E64 1.75 Å 1CV8 1CV8 1CV8 1CV8 1CV8 1CV8 Hofmann et al., 1993
sortase B ( Staphylococcus aureus)
complex with E-64 2.70 Å 1QX6 1QX6 1QX6 1QX6 1QX6 1QX6 Zong et al., 2004
ervatamin A ( Tabernaemontana divaricata)
ervatamin-C; complex with E64 2.70 Å 2PRE 2PRE 2PRE 2PRE 2PRE 2PRE Ghosh et al., 2008
complex with E64 2.90 Å 2PSC 2PSC 2PSC 2PSC 2PSC 2PSC Ghosh et al., 2008
complex with E64 2.85 Å 3BCN 3BCN 3BCN 3BCN 3BCN 3BCN Ghosh et al., 2008