CHEBI:28748 - doxorubicin

ChEBI IDCHEBI:28748
ChEBI Namedoxorubicin
Stars
Secondary ChEBI IDsCHEBI:2496, CHEBI:22270, CHEBI:42031
Last Modified9 June 2025
DownloadsMolfile
FormulaC27H29NO11
Net Charge0
Average Mass543.525
Monoisotopic Mass543.17406
SMILESCOc1cccc2c1C(=O)c1c(O)c3c(c(O)c1C2=O)C[C@@](O)(C(=O)CO)C[C@@H]3O[C@H]1C[C@H](N)[C@H](O)[C@H](C)O1
InChIInChI=1S/C27H29NO11/c1-10-22(31)13(28)6-17(38-10)39-15-8-27(36,16(30)9-29)7-12-19(15)26(35)21-20(24(12)33)23(32)11-4-3-5-14(37-2)18(11)25(21)34/h3-5,10,13,15,17,22,29,31,33,35-36H,6-9,28H2,1-2H3/t10-,13-,15-,17-,22+,27-/m0/s1
InChIKeyAOJJSUZBOXZQNB-TZSSRYMLSA-N
Species of MetaboliteComponentSourceComments
Escherichia coli (ncbitaxon:562) - PubMed (21988831)
Roles Classification
Biological Roles:
Escherichia coli metabolite  Any bacterial metabolite produced during a metabolic reaction in Escherichia coli.
metabolite  Any intermediate or product resulting from metabolism. The term 'metabolite' subsumes the classes commonly known as primary and secondary metabolites.
antimicrobial agent  A substance that kills or slows the growth of microorganisms, including bacteria, viruses, fungi and protozoans.
metabolite  Any intermediate or product resulting from metabolism. The term 'metabolite' subsumes the classes commonly known as primary and secondary metabolites.
ChEBI Ontology
Outgoing Relation(s)
doxorubicin (CHEBI:28748) has functional parent Adriamycinone (CHEBI:165223)
doxorubicin (CHEBI:28748) has parent hydride tetracene (CHEBI:32600)
doxorubicin (CHEBI:28748) has role Escherichia coli metabolite (CHEBI:76971)
doxorubicin (CHEBI:28748) is a p-quinones (CHEBI:25830)
doxorubicin (CHEBI:28748) is a aminoglycoside (CHEBI:47779)
doxorubicin (CHEBI:28748) is a anthracycline (CHEBI:48120)
doxorubicin (CHEBI:28748) is a anthracycline antibiotic (CHEBI:49322)
doxorubicin (CHEBI:28748) is a deoxy hexoside (CHEBI:35315)
doxorubicin (CHEBI:28748) is a primary α-hydroxy ketone (CHEBI:139590)
doxorubicin (CHEBI:28748) is a tertiary α-hydroxy ketone (CHEBI:139592)
doxorubicin (CHEBI:28748) is a tetracenequinones (CHEBI:51286)
doxorubicin (CHEBI:28748) is conjugate base of doxorubicin(1+) (CHEBI:64816)
Incoming Relation(s)
1-O-demethyl-6-deoxydoxorubicin (CHEBI:41919) has functional parent doxorubicin (CHEBI:28748)
3'-deamino-3'-(3-cyanomorpholin-4-yl)doxorubicin (CHEBI:41576) has functional parent doxorubicin (CHEBI:28748)
4'-deoxy-4'-iododoxorubicin (CHEBI:47897) has functional parent doxorubicin (CHEBI:28748)
4'-deoxy-4'-iododoxorubicinium (CHEBI:42037) has functional parent doxorubicin (CHEBI:28748)
4'-epidoxorubicin (CHEBI:47898) has functional parent doxorubicin (CHEBI:28748)
4'-epidoxorubicinium (CHEBI:41983) has functional parent doxorubicin (CHEBI:28748)
nemorubicin (CHEBI:42053) has functional parent doxorubicin (CHEBI:28748)
pirarubicin (CHEBI:94770) has functional parent doxorubicin (CHEBI:28748)
doxorubicin(1+) (CHEBI:64816) is conjugate acid of doxorubicin (CHEBI:28748)
IUPAC Name 
(1S,3S)-3,5,12-trihydroxy-3-(hydroxyacetyl)-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-α-L-lyxo-hexopyranoside
INNs  Source
doxorubicinChemIDplus
doxorubicineChemIDplus
doxorubicinumChemIDplus
Synonyms  Source
14-hydroxydaunomycinChemIDplus
14-hydroxydaunorubicineChemIDplus
(1S,3S)-3-glycoloyl-3,5,12-trihydroxy-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-α-L-lyxo-hexopyranosideChEBI
(8S-cis)-10-((3-amino-2,3,6-trideoxy-α-L-lyxo-hexopyranosyl)oxy)-7,8,9,10-tetrahydro-6,8,11-trihydroxy-8-(hydroxyacetyl)-1-methoxy-5,12-naphthacenedioneChemIDplus
AdriamycinKEGG COMPOUND
AdriamycinKEGG COMPOUND
Manual XrefsDatabases
960DrugCentral
C01661KEGG COMPOUND
D03899KEGG DRUG
DB00997DrugBank
DM2PDBeChem
LMPK13050001LIPID MAPS
LSM-4062LINCS
Registry NumbersSources
CAS:23214-92-8ChemIDplus
CAS:23214-92-8KEGG COMPOUND