Edit

Human Genomics

Genome variation, regulation, and interpretation resources

The Human Genomics Team provides resources to support the responsible archive and use of human genomic and related data for research and translational applications. It is also the home of GA4GH activities within the institute.

Ensembl Variation

Data and tools – including Ensembl VEP – to explore regions of the genome that differ between individual genomes (variants) and, where available, associated disease and phenotype information.

EGA

A service for permanent archiving and sharing of personally identifiable genetic, phenotypic, and clinical data generated in the context of biomedical research or research-focused healthcare systems.

DECIPHER

An interactive web-based database which incorporates a suite of tools designed to aid the interpretation of genomic variants and enhance clinical diagnosis by retrieving information from bioinformatics resources.

Gene2Phenotype (G2P)

A system that facilitates the development, validation, curation and distribution of large-scale, evidence-based datasets for use in diagnostic variant filtering.

Data resources

Database of Genomic Variants archive

Database of Genomic Variants archive

DGVa is a central archive that receives data from, and distributes data to, a number of resources. The DGVa accepts direct submissions from researchers and accession numbers for data objects included in these are given the prefix ‘e’. The DGVa also exchanges data on a regular basis with dbVar (a pee…

DECIPHER

DECIPHER

DECIPHER enables the sharing of candidate diagnostic variants and phenotypic data from people with genetic disorders to facilitate research and improve the diagnosis, management, and therapy of rare diseases. It aggregates up to date genomic and disease association data and provides tools to enable …

European Genome-phenome Archive

European Genome-phenome Archive

The EGA contains human data collected from research participants whose consent agreements authorise data release only to bona fide researchers and possibly for specific uses. Strict protocols govern how information is managed, stored and distributed by the EGA project. The EGA help desk provides ser…

European Variation Archive

European Variation Archive

    The European”>https://www.ebi.ac.uk/eva/”>Europeanhttps://www.ebi.ac.uk/eva/”>European”>https://www.ebi.ac.uk/eva/&…; Variation Archive is an open-access database of all types of genetic variation data, from all species. The EVA provides access to highly detailed, granular, raw variant data fro…

Gene2Phenotype

Gene2Phenotype

Gene2Phenotype enables the curation and distribution of evidenced-base gene-disease associations from the literature, for use in diagnostic variant filtering. Detailed information on allelic requirement, mutational consequence and mechanism are captured with phenotypic terms, confidence level and ev…

International Genome Sample Resource

International Genome Sample Resource

The 1000 Genomes Project is a fully open resource consisting of nearly 2500 sequenced individuals from five major world populations (Europeans, East Asians, Amerians, Africans and South Asians). It is designed to capture and provide all common (>1%) genetic variation. Data is made freely and openly …

Edit