Nucleotide Databases

The following are links to the various nucleotide-associated databases available at present from the EBI.

Database	Description
DGVa	The DGVarchive is a public repository for genomic variants at the individual level. The DGVa accepts submissions, accessions the variants at the sample and study level and grants a stable identifier that can be used in the publication.
EGA	The European Genome-phenome Archive (EGA) is a primary archive for all data that have not been consented for fully public release. The EGA follows strict protocols for information management, data storage, security and dissemination.
ENA	The European Nucleotide Archive (ENA) provides a comprehensive record of the world's nucleotide sequencing information, covering raw sequencing data, sequence assembly information and functional annotation.
ENA Genomes Server	Overview of all complete genomes deposited in the European Nucleotide Archive
Ensembl	Ensembl is a joint project between EMBL - EBI and the Sanger Institute to develop a software system which produces and maintains automatic annotation on selected eukaryotic genomes.
Ensembl Genomes	Ensembl Genomes is a sister project for Ensembl, that provides access to genomes of non-vertebrate species (bacteria, protists, fungi, plants and invertebrate metazoa).
Genome Reviews	The Genome Reviews database provides an up-to-date, standardised and comprehensively annotated view of the genomic sequence of organisms with completely deciphered genomes. Currently, Genome Reviews contains the genomes of archaea, bacteria and selected eukaryota.
HUGO Gene Nomenclature Committee (HGNC)	The HGNC assigns unique, official gene names and symbols to human genes.
IMGT/HLA	Immunogenetics database, compromising IMGT/HLA database of the human MHC complex.
IMGT/LIGM	Immunogenetics database, comprised of IMGT/LIGM database of immunoglobulins and T-cell receptors.
IPD	The Immuno Polymorphism Database (IPD), includes polymorphic genes of the immune system, like KIR, HPA and the non-human MHC.
Metagenomics	The EBI Metagenomics service is an automated pipeline for the analysis and archiving of metagenomic data that aims to provide insights into the functional and metabolic potential of a sample. You can freely browse all the public data in the repository. This new service is currently in beta.
Patentdata Resources	Patent data resources at the EBI contains patent abstracts, patent chemical compounds, patent sequences and patent equivalents. There are various ways of accessing and searching the patent data.