IHECRE00000235.3 LIVE JSON
Type | Single donor |
Status | Complete |
Project | CEEHRC |
Description | Primary Tissue from Diseased Thyroid from donor ID: SW-TTP-177 (55 years, Male, Diseased Thyroid sample with donor health condition: Thyroid Goiter) from Wiseman lab |
Previous versions | IHECRE00000235.2 IHECRE00000235.1 |
Metadata
Biomaterial type | Primary Tissue |
Donor id | SW-TTP-177 |
Donor life stage | adult |
Donor ethnicity | Unknown |
Donor sex | Male |
Gender | male |
Tissue type | Thyroid |
Donor age unit | year |
Taxon id | 9606 |
Species | Homo sapiens |
Sample ontology uri | NCI - cancer ontology : C0018021 , NCI - anatomic site ontology : C12400 , Ontobee : UBERON_0002046 |
Disease | Thyroid Goiter |
Donor age | 55 |
Donor health status ontology uri | https://ncimeta.nci.nih.gov/ncimbrowser/ConceptReport.jsp?dictionary=NCI%20MetaThesaurus&code=C0018021 |
Collection method | Gross Dissection |
Ihec reference epigenome identifier | CEMT0045 |
Sample id | CEMT0045 |
Tissue depot | Thyroid |
Donor health status | Thyroid Goiter |
Biomaterial provider | Wiseman lab |
Raw data
Assay Type | Experiment Type | Archive | Primary ID | Secondary ID | URL |
---|---|---|---|---|---|
WGS | WGS | EGA | EGAX00001248544 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
ChIP-Seq | Histone H3K4me1 | EGA | EGAX00001188201 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
ChIP-Seq | Histone H3K4me3 | EGA | EGAX00001188198 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
ChIP-Seq | Histone H3K9me3 | EGA | EGAX00001188199 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
ChIP-Seq | Histone H3K27me3 | EGA | EGAX00001188196 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
ChIP-Seq | Histone H3K36me3 | EGA | EGAX00001188197 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
ChIP-Seq | Histone H3K27ac | EGA | EGAX00001188208 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
ChIP-Seq | ChIP-Seq Input | EGA | EGAX00001188209 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
Bisulfite-Seq | DNA Methylation | EGA | EGAX00001273400 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
RNA-Seq | mRNA-Seq | EGA | EGAX00001248560 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
miRNA-Seq | smRNA-Seq | EGA | EGAX00001248523 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |