IHECRE00000235.3 LIVE JSON  


Type Single donor
Status Complete
Project CEEHRC
Description Primary Tissue from Diseased Thyroid from donor ID: SW-TTP-177 (55 years, Male, Diseased Thyroid sample with donor health condition: Thyroid Goiter) from Wiseman lab
Previous versions IHECRE00000235.2   IHECRE00000235.1  

Metadata


Biomaterial type Primary Tissue
Donor id SW-TTP-177
Donor life stage adult
Donor ethnicity Unknown
Donor sex Male
Gender male
Tissue type Thyroid
Donor age unit year
Taxon id 9606
Species Homo sapiens
Sample ontology uri NCI - cancer ontology : C0018021 , NCI - anatomic site ontology : C12400 , Ontobee : UBERON_0002046
Disease Thyroid Goiter
Donor age 55
Donor health status ontology uri https://ncimeta.nci.nih.gov/ncimbrowser/ConceptReport.jsp?dictionary=NCI%20MetaThesaurus&code=C0018021
Collection method Gross Dissection
Ihec reference epigenome identifier CEMT0045
Sample id CEMT0045
Tissue depot Thyroid
Donor health status Thyroid Goiter
Biomaterial provider Wiseman lab

Raw data


Assay Type Experiment Type Archive Primary ID Secondary ID URL
WGS WGS EGA EGAX00001248544 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963
ChIP-Seq Histone H3K4me1 EGA EGAX00001188201 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963
ChIP-Seq Histone H3K4me3 EGA EGAX00001188198 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963
ChIP-Seq Histone H3K9me3 EGA EGAX00001188199 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963
ChIP-Seq Histone H3K27me3 EGA EGAX00001188196 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963
ChIP-Seq Histone H3K36me3 EGA EGAX00001188197 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963
ChIP-Seq Histone H3K27ac EGA EGAX00001188208 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963
ChIP-Seq ChIP-Seq Input EGA EGAX00001188209 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963
Bisulfite-Seq DNA Methylation EGA EGAX00001273400 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963
RNA-Seq mRNA-Seq EGA EGAX00001248560 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963
miRNA-Seq smRNA-Seq EGA EGAX00001248523 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963