IHECRE00000105.3 LIVE JSON
| Type | Single donor |
| Status | Complete |
| Project | BLUEPRINT |
| Description | CD34-negative, CD41-positive, CD42-positive megakaryocyte cell from cord blood of donor: S004BT |
| Previous versions | IHECRE00000105.2 IHECRE00000105.1 |
Metadata
| Biomaterial type | Primary Cell Culture |
| Disease ontology uri | NA |
| Donor id | S004BT |
| Donor ethnicity | NA |
| Passage if expanded | http://www.blueprint-epigenome.eu/index.cfm?p=7BF8A4B6-F4FE-861A-2AD57A08D63D0B58 |
| Donor sex | Female |
| Subject id | S004BT |
| Gender | female |
| Tissue type | cord blood |
| Taxon id | 9606 |
| Species | Homo sapiens |
| Disease | None |
| Sample ontology uri | http://purl.obolibrary.org/obo/CL_0002026;http://purl.obolibrary.org/obo/UBERON_0012168 |
| Donor age | 0 - 5 |
| Culture conditions | http://www.blueprint-epigenome.eu/index.cfm?p=7BF8A4B6-F4FE-861A-2AD57A08D63D0B58 |
| Phenotype | CL:0002026;PATO:0000461;UBERON:0012168 |
| Cell type | CD34-negative, CD41-positive, CD42-positive megakaryocyte cell |
| Markers | CD41+ CD42+ |
| Biomaterial provider | NIHR Cambridge BioResource |
| Donor health status | NA |
Raw data
| Assay Type | Experiment Type | Archive | Primary ID | Secondary ID | URL |
|---|---|---|---|---|---|
| ChIP-Seq | ChIP-Seq Input | EGA | EGAX00001171935 | EGAD00001002362 | https://ega-archive.org/datasets/EGAD00001002362 |
| RNA-Seq | total-RNA-Seq | EGA | EGAX00001133250 | EGAD00001002339 | https://ega-archive.org/datasets/EGAD00001002339 |
| DNase-Hypersensitivity | Chromatin Accessibility | EGA | EGAX00001293539 | EGAD00001002468 | https://ega-archive.org/datasets/EGAD00001002468 |
| ChIP-Seq | Histone H3K36me3 | EGA | EGAX00001128199 | EGAD00001002362 | https://ega-archive.org/datasets/EGAD00001002362 |
| ChIP-Seq | Histone H3K27ac | EGA | EGAX00001171958 | EGAD00001002362 | https://ega-archive.org/datasets/EGAD00001002362 |
| ChIP-Seq | Histone H3K9me3 | EGA | EGAX00001128205 | EGAD00001002362 | https://ega-archive.org/datasets/EGAD00001002362 |
| ChIP-Seq | Histone H3K4me1 | EGA | EGAX00001128249 | EGAD00001002362 | https://ega-archive.org/datasets/EGAD00001002362 |
| ChIP-Seq | Histone H3K4me3 | EGA | EGAX00001128197 | EGAD00001002362 | https://ega-archive.org/datasets/EGAD00001002362 |
| ChIP-Seq | Histone H3K27me3 | EGA | EGAX00001128204 | EGAD00001002362 | https://ega-archive.org/datasets/EGAD00001002362 |
| Bisulfite-Seq | DNA Methylation | EGA | EGAX00001147732 | EGAD00001002311 | https://ega-archive.org/datasets/EGAD00001002311 |
| ChIP-Seq | Histone H3K9me3 | EGA | EGAX00001326462 | EGAD00001002362 | https://ega-archive.org/datasets/EGAD00001002362 |