Ligand clusters for UniProt code Q8U093

Ligand clusters for Q8U093: Tryptophan synthase beta chain 1 from Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)

		3 ligand clusters Cluster 1. 7 ligand types 17 ligands Cluster 2. 1 ligand type 15 ligands Cluster 3. 1 ligand type 3 ligands
Representative protein: 5dw0A

Structures

PDB		Schematic diagram
5dw0A
6cuvA
6amhA
6am9A
6am8A
		more ...

Cluster 1 contains 7 ligand types

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Ligand		Description
		1. Ligand: PLP × 2 pyridoxal phosphate Pyridoxal-5'-Phosphate PDB codes: 1v8z(A), 1wdw(B).
		2. Ligand: PO4 × 5 Phosphate ion PDB codes: 5dvz(A), 5e0k(B), 5t6m(A), 6am7(A), 6cuv(A).
		3. Ligand: PLS × 4 [3-Hydroxy-2-Methyl-5-Phosphonooxymethyl-Pyridin-4- Ylmethyl]-Serine PDB codes: 5dw0(A), 5vm5(A), 6am9(A), 6amh(A).
		4. Ligand: TRP × 3 PDB codes: 5dw3(A), 6am8(A), 6ami(A).
		5. Ligand: FEJ × 1 (2s,3s)-3-Hydroxy-2-[(E)-({3-Hydroxy-2-Methyl-5- [(Phosphonooxy)methyl]pyridin-4- Yl}methylidene)amino]- 4-Methylpentanoic acid (non-Preferred name) PDB code: 6cut(A).
		6. Ligand: FEV × 1 (2e)-2-[(E)-({3-Hydroxy-2-Methyl-5-[(Phosphonooxy) methyl]pyridin-4-Yl}methylidene)amino]pent-2- Enoic acid PDB code: 6cuz(A).
		7. Ligand: THR × 1 PDB code: 5ixj(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
_Na		1. Metal: _NA × 15 PDB codes: 1v8z(A), 5dvz(A), 5dw0(A), 5dw3(A), 5ixj(A), 5t6m(A), 6am7(A), 6am8(A), 6am9(A), 6amc(A), 6amh(A), 6ami(A), 6cut(A), 6cuv(A), 6cuz(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
_Na		1. Metal: _NA × 3 PDB codes: 6am7(A), 6am9(A), 6cuz(A).