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Ligand clusters for UniProt code Q5G940

Ligand clusters for Q5G940: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ from Helicobacter pylori

6 ligand clusters
Cluster 1.
14 ligand types
23 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
7 ligands
Cluster 5.
1 ligand type
4 ligands
Cluster 6.
1 ligand type
7 ligands
Representative protein: 3b7jA  
JSmol
 

Structures

PDB   Schematic diagram
3b7jA    
3d04A    
3dp3A    
3ed0A    
3cf8A    
 more ...

 

 Cluster 1 contains 14 ligand types

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Ligand Description

_Cl
 
1. Metal: _CL × 10
PDB codes: 3cf8(A), 3cf9(A), 3d04(A), 3doy(A), 3doz(A), 3dp0(A), 3dp1(A), 3dp2(A), 3dp3(A), 3ed0(A).


 
2. Ligand: 2BC × 1
N'-[(1e)-(3,5-Dibromo-2,4-Dihydroxyphenyl) methylidene]naphthalene-2-Carbohydrazide
PDB code: 3dp0(A).


 
3. Ligand: 2BE × 1
4-Chloro-N'-[(1e)-(3,5-Dibromo-2,4-Dihydroxyphenyl) methylidene]benzohydrazide
PDB code: 3doy(A).


 
4. Ligand: 2RB × 1
N'-[(1e)-(3,5-Dibromo-2,4-Dihydroxyphenyl)methylidene]- 4-Methoxybenzohydrazide
PDB code: 3dp1(A).


 
5. Ligand: 3BE × 1
3-Bromo-N'-[(1e)-(3,5-Dibromo-2,4-Dihydroxyphenyl) methylidene]benzohydrazide
PDB code: 3doz(A).


 
6. Ligand: 4BB × 1
4-Tert-Butyl-N'-[(1e)-(3,5-Dibromo-2,4- Dihydroxyphenyl)methylidene]benzohydrazide
PDB code: 3dp3(A).


 
7. Ligand: 4BE × 1
4-Bromo-N'-[(1e)-(3,5-Dibromo-2,4-Dihydroxyphenyl) methylidene]benzohydrazide
PDB code: 3dp2(A).


 
8. Ligand: AGI × 1
5,7-Dihydroxy-2-(4-Hydroxyphenyl)-4h-Chromen-4-One
PDB code: 3cf9(A).


 
9. Ligand: EMO × 1
3-Methyl-1,6,8-Trihydroxyanthraquinone
PDB code: 3ed0(A).


 
10. Ligand: JUG × 1
5-Hydroxynaphthalene-1,4-Dione
PDB code: 3b7j(A).


 
11. Ligand: PN7 × 1
N~3~-[(2s)-2-Hydroxy-3,3-Dimethyl-4-(Phosphonooxy) butanoyl]-N-(2-Sulfanylethyl)-Beta-Alaninamide
PDB code: 6ihc(A).


 
12. Ligand: PNS × 1
4'-Phosphopantetheine
PDB code: 4zjb(A).


 
13. Ligand: QUE × 1
3,5,7,3',4'-Pentahydroxyflavone
PDB code: 3cf8(A).


 
14. Ligand: SAK × 1
(2s)-5-Hydroxy-2-(4-Hydroxyphenyl)-7-Methoxy-2,3- Dihydro-4h-Chromen-4-One
PDB code: 3d04(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: CIT × 2
citric acid
Citric acid
PDB codes: 4zjb(A), 6ihc(A).


 
2. Ligand: BEN × 1
Benzamidine
PDB code: 3doz(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: CIT × 1
citric acid
Citric acid
PDB code: 6ihc(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: BEN × 7
Benzamidine
PDB codes: 3b7j(A), 3cf8(A), 3d04(A), 3doy(A), 3doz(A), 3dp2(A), 3ed0(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: BEN × 4
Benzamidine
PDB codes: 3cf8(A), 3d04(A), 3dp2(A), 3dp3(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: BEN × 7
Benzamidine
PDB codes: 3cf8(A), 3doy(A), 3doz(A), 3dp0(A), 3dp2(A), 3dp3(A), 3ed0(A).

 

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