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Ligand clusters for UniProt code Q55891
Ligand clusters for Q55891: Phycocyanobilin:ferredoxin oxidoreductase from Synechocystis sp. (strain PCC 6803 / Kazusa)
Top 6 (of 20) ligand clusters
Cluster 1.
3 ligand types
17 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
4 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 2d1eA
Structures
PDB
Schematic diagram
2d1e
A
4qcd
A
3f0m
A
3f0l
A
4eod
A
more ...
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
BLA × 14
Biliverdine IX alpha
PDB codes:
2d1e
(A),
3ajg
(A),
3f0l
(A),
3f0m
(A),
3i95
(A),
3nb8
(A),
3nb9
(A),
4eoc
(A),
4eod
(A),
4eoe
(A),
4qcd
(A),
5b4h
(A),
5b4i
(A),
5b4j
(A).
2. Ligand:
BL3 × 2
3-[2-[(Z)-[3-(2-Carboxyethyl)-5-[(Z)-(3-Ethenyl-4- Methyl-5-Oxo-Pyrrol-2-Ylidene)methyl]-4-Methyl-
Pyrrol- 2-Ylidene]methyl]-5-[(Z)-(3-Ethenyl-4-Methyl-5-Oxo- Pyrrol-2-Ylidene)methyl]-4-Methyl-1h-
Pyrrol-3- Yl]propanoic acid
PDB codes:
3ajh
(A),
3i94
(A).
3. Ligand:
18B × 1
3-[2-[(Z)-[3-(2-Carboxyethyl)-5-[(Z)-(3-Ethenyl-4- Methyl-5-Oxo-Pyrrol-2-Ylidene)methyl]-4-Methyl-
Pyrrol- 2-Ylidene]methyl]-5-[(Z)-(4-Ethyl-3-Methyl-5-Oxo- Pyrrol-2-Ylidene)methyl]-4-Methyl-1h-
Pyrrol-3- Yl]propanoic acid
PDB code:
3i8u
(X).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
3i94
(A).
_Na
2. Metal:
_NA × 1
PDB code:
2d1e
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 4
1,2-Ethanediol
PDB codes:
3f0l
(A),
3f0m
(A),
3nb8
(A),
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
3f0l
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
3f0l
(A),
3f0m
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
3f0l
(A),