Ligand clusters for UniProt code Q00511

Ligand clusters for Q00511: Uricase from Aspergillus flavus

		Top 6 (of 8) ligand clusters Cluster 1. 14 ligand types 31 ligands Cluster 2. 4 ligand types 4 ligands Cluster 3. 2 ligand types 2 ligands Cluster 4. 1 ligand type 2 ligands Cluster 5. 1 ligand type 2 ligands Cluster 6. 1 ligand type 9 ligands
Representative protein: 4cw0A

Structures

PDB		Schematic diagram
4cw0A
7a0lA
2fxlA
1wrrA
1r4sA
		more ...

Cluster 1 contains 14 ligand types

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Ligand		Description
		1. Ligand: 2AL × 1 allantoin 1-(2,5-Dioxo-2,5-Dihydro-1h-Imidazol-4-Yl)urea PDB code: 2fxl(A).
		2. Ligand: OXC × 1 oteracil Oxonic acid PDB code: 1r4u(A).
__K		3. Metal: __K × 1 PDB code: 3gko(A).
		4. Ligand: MUA × 1 9-Methyl uric acid PDB code: 1r4s(A).
		5. Ligand: URN × 1 5,6-Diaminopyrimidine-2,4(1h,3h)-Dione PDB code: 1ws2(A).
		6. Ligand: UNC × 2 5-Amino-6-Nitropyrimidine-2,4(1h,3h)-Dione PDB codes: 1wrr(A), 1xxj(A).
		7. Ligand: URA × 1 Uracil PDB code: 1ws3(A).
		8. Ligand: GUN × 2 Guanine PDB codes: 1xt4(A), 1xy3(A).
		9. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 1r56(A).
		10. Ligand: AZA × 6 8-Azaxanthine PDB codes: 1r51(A), 2fub(A), 2pes(A), 3bk8(A), 3gko(A), 7a0l(A).
		11. Ligand: MUA × 4 9-Methyl uric acid PDB codes: 4cw0(A), 4cw3(A), 4cw6(A), 6rgt(A).
		12. Ligand: URC × 4 Uric acid PDB codes: 3bjp(A), 4d12(A), 4d17(A), 4d19(A).
		13. Ligand: IUP × 3 5-(Hydro)peroxoisourate PDB codes: 4d13(A), 4d17(A), 4d19(A).
		14. Ligand: XDS × 3 (5s)-5-(Dioxidanyl)-9-Methyl-7h-Purine-2,6,8-Trione PDB codes: 4cw2(A), 4cw3(A), 4cw6(A).

Cluster 2 contains 4 ligand types

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Ligand		Description
		1. Ligand: URN × 1 5,6-Diaminopyrimidine-2,4(1h,3h)-Dione PDB code: 1ws2(A).
		2. Ligand: UNC × 1 5-Amino-6-Nitropyrimidine-2,4(1h,3h)-Dione PDB code: 1xxj(A).
		3. Ligand: URA × 1 Uracil PDB code: 1ws3(A).
		4. Ligand: GUN × 1 Guanine PDB code: 1xy3(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: CYS × 1 cysteine PDB code: 2fub(A).
		2. Ligand: TRS × 1 tromethamine 2-Amino-2-Hydroxymethyl-Propane-1,3-Diol PDB code: 6rgt(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: PDC × 2 Pyridine-2,6-Dicarboxylic acid PDB codes: 2pes(A),

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: PDC × 2 Pyridine-2,6-Dicarboxylic acid PDB codes: 2pes(A),

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: MPD × 9 (4s)-2-Methyl-2,4-Pentanediol PDB codes: 4cw0(A), 4cw2(A), 4cw3(A), 4cw6(A), 4d12(A), 4d13(A), 4d17(A), 4d19(A), 6rgt(A).