Ligand clusters for UniProt code P49902

Ligand clusters for P49902: Cytosolic purine 5'-nucleotidase from Homo sapiens

		Top 6 (of 36) ligand clusters Cluster 1. 16 ligand types 110 ligands Cluster 2. 2 ligand types 4 ligands Cluster 3. 4 ligand types 15 ligands Cluster 4. 3 ligand types 10 ligands Cluster 5. 5 ligand types 19 ligands Cluster 6. 4 ligand types 22 ligands
Representative protein: 6ddqA

Structures

PDB		Schematic diagram
6ddqA
6ddoA
6ddkA
5cqzA
2jc9A
		more ...

Cluster 1 contains 16 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file. Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: GOL × 29 glycerin Glycerol PDB codes: 2xcw(A), 2xcx(A), 2xjc(A), 2xjd(A), 2xjf(A), 5cr7(A), 5k7y(A), 5l4z(A), 5l50(A), 5opk(A), 5opl(A), 5opm(A), 5opn(A), 5opo(A),
_Mg		2. Metal: _MG × 21 PDB codes: 2jc9(A), 2jcm(A), 2xcv(A), 2xcw(A), 2xjc(A), 2xjd(A), 2xje(A), 4h4b(A), 5cqz(A), 5cr7(A), 5opk(A), 5opl(A), 5opm(A), 5opo(A), 6ddc(A), 6ddz(A), 6fir(A), 6fis(A), 6fiu(A), 6fiw(A), 6fxh(A).
		3. Ligand: ADN × 1 adenosine Adenosine PDB code: 2jc9(A).
_Mn		4. Metal: _MN × 1 PDB code: 6ddb(A).
		5. Ligand: SO4 × 4 Sulfate ion PDB codes: 2j2c(A), 2jc9(A),
		6. Ligand: PO4 × 21 Phosphate ion PDB codes: 2xjd(A), 5cr7(A), 5opk(A), 5opm(A), 6dd3(A), 6ddb(A), 6ddc(A), 6ddl(A), 6ddo(A), 6ddq(A), 6ddx(A), 6ddy(A), 6ddz(A), 6de0(A), 6de1(A), 6de2(A), 6de3(A).
		7. Ligand: SO4 × 14 Sulfate ion PDB codes: 2jcm(A), 4h4b(A), 5cqz(A), 6fir(A), 6fis(A), 6fiu(A), 6fiw(A), 6fxh(A),
		8. Ligand: ATP × 6 Adenosine-5'-Triphosphate PDB codes: 2xcw(A), 2xjd(A), 2xje(A), 6ddz(A), 6de2(A), 6de3(A).
		9. Ligand: IMP × 3 Inosinic acid PDB codes: 2xcv(A), 2xcw(A), 6ddh(A).
		10. Ligand: DG2 × 2 (2r)-2,3-Diphosphoglyceric acid PDB codes: 2xcv(A), 2xjf(A).
		11. Ligand: DTP × 2 2'-Deoxyadenosine 5'-Triphosphate PDB codes: 5opk(A), 5opm(A).
		12. Ligand: EDO × 2 1,2-Ethanediol PDB codes: 6de2(A),
		13. Ligand: 11H × 1 9,10-Dioxo-9,10-Dihydroanthracene-2,6-Disulfonic acid PDB code: 4h4b(A).
		14. Ligand: 5GP × 1 Guanosine-5'-Monophosphate PDB code: 2xjc(A).
		15. Ligand: B4P × 1 Bis(adenosine)-5'-Tetraphosphate PDB code: 2xjc(A).
		16. Ligand: U5P × 1 Uridine-5'-Monophosphate PDB code: 2xje(A).

Cluster 2 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: GOL × 3 glycerin Glycerol PDB codes: 2xjc(A), 5opk(A), 6fir(A).
		2. Ligand: 5WO × 1 ~{N}-(7~{h}-Purin-6-Yl)-3-(3-Pyrrol-1-Ylphenyl) benzamide PDB code: 5cr7(A).

Cluster 3 contains 4 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: ADN × 1 adenosine Adenosine PDB code: 2jc9(A).
		2. Ligand: SO4 × 11 Sulfate ion PDB codes: 2j2c(A), 2jc9(A), 2jcm(A), 4h4b(A), 5cqz(A), 6fir(A), 6fis(A), 6fiu(A), 6fxh(A),
		3. Ligand: PO4 × 2 Phosphate ion PDB codes: 6dd3(A), 6de0(A).
		4. Ligand: ACT × 1 Acetate ion PDB code: 5cr7(A).

Cluster 4 contains 3 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: GOL × 8 glycerin Glycerol PDB codes: 2xjc(A), 5l4z(A), 5l50(A), 5opl(A), 5opn(A), 5opp(A), 6fiu(A).
		2. Ligand: 53O × 1 1-(Biphenyl-3-Yl)-1h-Imidazole PDB code: 5cqz(A).
		3. Ligand: SO4 × 1 Sulfate ion PDB code: 5cqz(A).

Cluster 5 contains 5 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: GOL × 7 glycerin Glycerol PDB codes: 5cqz(A), 5l4z(A), 5opk(A), 5opm(A), 5opo(A), 6fir(A).
		2. Ligand: SO4 × 1 Sulfate ion PDB code: 2j2c(A).
		3. Ligand: PO4 × 7 Phosphate ion PDB codes: 5cr7(A), 6ddb(A), 6ddc(A), 6ddk(A), 6ddl(A), 6ddo(A), 6ddq(A).
		4. Ligand: SO4 × 3 Sulfate ion PDB codes: 6fis(A), 6fiu(A), 6fxh(A).
		5. Ligand: ACT × 1 Acetate ion PDB code: 5cr7(A).

Cluster 6 contains 4 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: GOL × 19 glycerin Glycerol PDB codes: 2xcw(A), 2xcx(A), 2xjc(A), 2xjf(A), 5k7y(A), 5l4z(A), 5l50(A), 5opk(A), 5opn(A), 5opo(A), 5opp(A), 6dd3(A), 6ddy(A), 6ddz(A), 6de0(A), 6de1(A), 6fir(A), 6fiu(A), 6fxh(A).
		2. Ligand: ACT × 1 Acetate ion PDB code: 5cr7(A).
		3. Ligand: EDO × 1 1,2-Ethanediol PDB code: 6de2(A).
		4. Ligand: SO4 × 1 Sulfate ion PDB code: 5cqz(A).