Ligand clusters for UniProt code P00593

Ligand clusters for P00593: Phospholipase A2 OS=Bos taurus GN=PLA2G1B PE=1 SV=2

		Top 6 (of 9) ligand clusters Cluster 1. 9 ligand types 52 ligands Cluster 2. 3 ligand types 9 ligands Cluster 3. 2 ligand types 5 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 2 ligands Cluster 6. 1 ligand type 2 ligands
Representative protein: 1bp2A

Structures

PDB		Schematic diagram
1bp2A
1gh4A
1uneA
1g4iA
3bp2A
		more ...

Cluster 1 contains 9 ligand types

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Ligand		Description
		1. Ligand: GEL × 1 1-O-Octyl-2-Heptylphosphonyl-Sn-Glycero-3- Phosphoethanolamine PDB code: 1mkv(A).
		2. Ligand: MPD × 12 (4s)-2-Methyl-2,4-Pentanediol PDB codes: 1bp2(A), 1g4i(A), 1gh4(A), 1o3w(A), 1vkq(A), 1vl9(A), 2bch(A), 2bd1(A), 4bp2(A).
		3. Ligand: MRD × 4 (4r)-2-Methylpentane-2,4-Diol PDB codes: 1vl9(A), 2bax(A),
		4. Ligand: GLE × 1 1-Decyl-3-Trifluoro ethyl-Sn-Glycero-2-Phosphomethanol PDB code: 1fdk(A).
		5. Ligand: TRS × 1 2-Amino-2-Hydroxymethyl-Propane-1,3-Diol PDB code: 2b96(A).
		6. Ligand: ANN × 2 4-Methoxybenzoic acid PDB codes: 1o2e(A), 2b96(A).
_Ca		7. Metal: _CA × 28 PDB codes: 1bp2(A), 1bpq(A), 1c74(A), 1ceh(A), 1fdk(A), 1g4i(A), 1gh4(A), 1irb(A), 1kvw(A), 1kvx(A), 1kvy(A), 1mks(A), 1mkt(A), 1mku(A), 1mkv(A), 1o2e(A), 1o3w(A), 1une(A), 1vkq(A), 1vl9(A), 2b96(A), 2bax(A), 2bch(A), 2bd1(A), 2bpp(A), 2zp4(A), 3bp2(A), 4bp2(A).
		8. Ligand: MRD × 2 (4r)-2-Methylpentane-2,4-Diol PDB codes: 2zp3(A), 2zp4(A).
		9. Ligand: MRD-MRD × 1 MRD=(4r)-2-Methylpentane-2,4-Diol. PDB code: 1g4i(A).

Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: MRD × 4 (4r)-2-Methylpentane-2,4-Diol PDB codes: 1g4i(A), 1vl9(A), 2bax(A),
		2. Ligand: MPD × 3 (4s)-2-Methyl-2,4-Pentanediol PDB codes: 1vkq(A), 2bch(A),
		3. Ligand: TRS × 2 2-Amino-2-Hydroxymethyl-Propane-1,3-Diol PDB codes: 2b96(A), 2zp3(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: TRS × 1 2-Amino-2-Hydroxymethyl-Propane-1,3-Diol PDB code: 2b96(A).
_Ca		2. Metal: _CA × 4 PDB codes: 2b96(A), 2zp3(A), 2zp4(A), 2zp5(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: MPD × 1 (4s)-2-Methyl-2,4-Pentanediol PDB code: 1bp2(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: MPD × 2 (4s)-2-Methyl-2,4-Pentanediol PDB codes: 1g4i(A), 2bax(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: MPD × 2 (4s)-2-Methyl-2,4-Pentanediol PDB codes: 1vkq(A), 2bch(A).