Assemblies
Multimeric state:
hetero hexamer
Accessible surface area:
123119.72 Å2
Buried surface area:
35423.7 Å2
Dissociation area:
2,197.35
Å2
Dissociation energy (ΔGdiss):
10.74
kcal/mol
Dissociation entropy (TΔSdiss):
14.62
kcal/mol
Symmetry number:
1
PDBe Complex ID:
PDB-CPX-106290
Macromolecules
Chains: A, B
Length: 350 amino acids
Theoretical weight: 37.96 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Escherichia coli
UniProt:
Pfam:
Length: 350 amino acids
Theoretical weight: 37.96 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Escherichia coli
UniProt:
- Canonical:
A0QSL8 (Residues: 1-350; Coverage: 100%)
Pfam:
- RNA polymerase Rpb3/Rpb11 dimerisation domain
- RNA polymerase Rpb3/RpoA insert domain
- Bacterial RNA polymerase, alpha chain C terminal domain
Chain: C
Length: 1178 amino acids
Theoretical weight: 129.46 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Escherichia coli
UniProt:
Pfam:
Length: 1178 amino acids
Theoretical weight: 129.46 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Escherichia coli
UniProt:
- Canonical: P60281 (Residues: 2-1169; Coverage: 100%)
Pfam:
- RNA polymerase beta subunit
- RNA polymerase Rpb2, domain 2
- RNA polymerase Rpb2, domain 3
- RNA polymerase beta subunit external 1 domain
- RNA polymerase Rpb2, domain 6
- RNA polymerase Rpb2, domain 7
- DNA-directed RNA polymerase beta subunit, bacterial-type
- DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily
- DNA-directed RNA polymerase, subunit 2
- RNA polymerase, beta subunit, protrusion
- RNA polymerase Rpb2, domain 2
- RNA polymerase Rpb2, domain 2 superfamily
- RNA polymerase Rpb2, domain 3
- DNA-directed RNA polymerase, beta subunit, external 1 domain
- DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily
- DNA-directed RNA polymerase, subunit 2, hybrid-binding domain
- RNA polymerase Rpb2, OB-fold
- RNA polymerase, beta subunit, conserved site
- RNA polymerase Rpb2, domain 7
Chain: D
Length: 1325 amino acids
Theoretical weight: 147.79 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Escherichia coli
UniProt:
Pfam:
Length: 1325 amino acids
Theoretical weight: 147.79 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Escherichia coli
UniProt:
- Canonical: A0QS66 (Residues: 2-1317; Coverage: 100%)
Pfam:
- RNA polymerase Rpb1, domain 1
- RNA polymerase Rpb1, domain 2
- RNA polymerase Rpb1, domain 3
- RNA polymerase Rpb1, domain 4
- RNA polymerase Rpb1, domain 5
- RNA polymerase Rpb1, clamp domain superfamily
- DNA-directed RNA polymerase, subunit beta-prime, bacterial type
- RNA polymerase Rpb1, domain 1
- DNA-directed RNA polymerase, subunit beta-prime
- RNA polymerase, N-terminal
- RNA polymerase, alpha subunit
- RNA polymerase Rpb1, domain 3
- RNA polymerase Rpb1, domain 3 superfamily
- RNA polymerase Rpb1, funnel domain superfamily
- RNA polymerase Rpb1, domain 4
- RNA polymerase Rpb1, domain 5
Chain: E
Length: 107 amino acids
Theoretical weight: 11.51 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Escherichia coli
UniProt:
Pfam: RNA polymerase Rpb6
InterPro:
Length: 107 amino acids
Theoretical weight: 11.51 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Escherichia coli
UniProt:
- Canonical: A0QWT1 (Residues: 2-107; Coverage: 99%)
Pfam: RNA polymerase Rpb6
InterPro:
Chain: F
Length: 466 amino acids
Theoretical weight: 51.57 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Escherichia coli
UniProt:
Pfam:
InterPro:
Length: 466 amino acids
Theoretical weight: 51.57 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Escherichia coli
UniProt:
- Canonical: A0QW02 (Residues: 1-466; Coverage: 100%)
Pfam:
InterPro:
- RNA polymerase sigma factor RpoD
- RNA polymerase sigma factor, region 2
- RNA polymerase sigma-70 region 1.2
- RNA polymerase sigma factor RpoD, C-terminal
- RNA polymerase sigma-70-like domain
- RNA polymerase sigma-70 region 2
- RNA polymerase sigma-70
- RNA polymerase sigma factor, region 3/4-like
- Winged helix-like DNA-binding domain superfamily
- RNA polymerase sigma-70 region 3
- RNA polymerase sigma-70 region 4
