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PanDDA analysis group deposition -- Auto-refined data of Aar2/RNaseH for ground state model 30, DMSO-free

Source organism: Saccharomyces cerevisiae S288C
Biochemical function: not assigned
Biological process: mRNA splicing, via spliceosome
Cellular component: spliceosomal complex

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GO terms

Biochemical function:
  • not assigned
Biological process:
Cellular component:

Sequence families

Pfam Protein families (Pfam)
PF05282
Domain description: AAR2 C-terminal repeat region
Occurring in:
  1. A1 cistron-splicing factor AAR2
The deposited structure of PDB entry 5r1f contains 1 copy of Pfam domain PF05282 (AAR2 C-terminal repeat region) in A1 cistron-splicing factor AAR2. Showing 1 copy in chain B.

PF20981
Domain description: AAR2 N-terminal domain
Occurring in:
  1. A1 cistron-splicing factor AAR2
The deposited structure of PDB entry 5r1f contains 1 copy of Pfam domain PF20981 (AAR2 N-terminal domain) in A1 cistron-splicing factor AAR2. Showing 1 copy in chain B.

PF12134
Domain description: PRP8 domain IV core
Occurring in:
  1. Pre-mRNA-splicing factor 8
The deposited structure of PDB entry 5r1f contains 1 copy of Pfam domain PF12134 (PRP8 domain IV core) in Pre-mRNA-splicing factor 8. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR007946
Domain description: A1 cistron-splicing factor, AAR2
Occurring in:
  1. A1 cistron-splicing factor AAR2
IPR021983
Domain description: PRP8 domain IV core
Occurring in:
  1. Pre-mRNA-splicing factor 8
IPR033648
Domain description: AAR2, C-terminal domain
Occurring in:
  1. A1 cistron-splicing factor AAR2
IPR038514
Domain description: AAR2, C-terminal domain superfamily
Occurring in:
  1. A1 cistron-splicing factor AAR2
IPR033647
Domain description: AAR2, N-terminal
Occurring in:
  1. A1 cistron-splicing factor AAR2
IPR038516
Domain description: AAR2, N-terminal domain superfamily
Occurring in:
  1. A1 cistron-splicing factor AAR2
IPR043173
Domain description: Prp8 RNase domain IV, fingers region
Occurring in:
  1. Pre-mRNA-splicing factor 8
IPR027652
Domain description: Pre-mRNA-processing-splicing factor 8
Occurring in:
  1. Pre-mRNA-splicing factor 8
IPR012337
Domain description: Ribonuclease H-like superfamily
Occurring in:
  1. Pre-mRNA-splicing factor 8
IPR043172
Domain description: Prp8 RNase domain IV, palm region
Occurring in:
  1. Pre-mRNA-splicing factor 8

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