› › Structure analysis

Structure of the 2C/Ld/QL9 allogeneic complex

X-ray diffraction
2.35Å resolution
PDB entry 2oi9 coloured by chain, front view.
PDB entry 2oi9 coloured by chain, side view.
PDB entry 2oi9 coloured by chain, top view.
Source organism: Mus musculus
Assembly composition:
hetero tetramer (preferred)
Entry contents: 4 distinct polypeptide molecules

Quick links

Assemblies

Assembly 1 (preferred)
Download    3D Visualisation
Multimeric state: hetero tetramer
Accessible surface area: 17661.19 Å2
Buried surface area: 5280.81 Å2
Dissociation area: 992 Å2
Dissociation energy (ΔGdiss): 2.75 kcal/mol
Dissociation entropy (TΔSdiss): 12.35 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-106900

Macromolecules

H-2 class I histocompatibility antigen, L-D alpha chain
Chain: A
Length: 179 amino acids
Theoretical weight: 20.94 KDa
Source organism: Mus musculus
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: P01897 (Residues: 25-203; Coverage: 53%)
Gene name: H2-L
Pfam: Class I Histocompatibility antigen, domains alpha 1 and 2
InterPro:
CATH: MHC class I-like antigen recognition-like
H-2 class I histocompatibility antigen, L-D alpha chain in PDB entry 2oi9, assembly 1, front view.
H-2 class I histocompatibility antigen, L-D alpha chain in PDB entry 2oi9, assembly 1, side view.
H-2 class I histocompatibility antigen, L-D alpha chain in PDB entry 2oi9, assembly 1, top view.
Molecule details ›

Search similar proteins

T-cell receptor alpha chain V region PHDS58
Chain: B
Length: 113 amino acids
Theoretical weight: 12.49 KDa
Source organism: Mus musculus
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: P01738 (Residues: 21-130; Coverage: 100%)
Pfam: Immunoglobulin V-set domain
InterPro:
CATH: Immunoglobulins
T-cell receptor alpha chain V region PHDS58 in PDB entry 2oi9, assembly 1, front view.
T-cell receptor alpha chain V region PHDS58 in PDB entry 2oi9, assembly 1, side view.
T-cell receptor alpha chain V region PHDS58 in PDB entry 2oi9, assembly 1, top view.
Molecule details ›

Search similar proteins

Ig-like domain-containing protein
Chain: C
Length: 121 amino acids
Theoretical weight: 13.27 KDa
Source organism: Mus musculus
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: A2NTY6 (Residues: 30-144; Coverage: 96%)
Pfam: Immunoglobulin V-set domain
InterPro:
CATH: Immunoglobulins
Ig-like domain-containing protein in PDB entry 2oi9, assembly 1, front view.
Ig-like domain-containing protein in PDB entry 2oi9, assembly 1, side view.
Ig-like domain-containing protein in PDB entry 2oi9, assembly 1, top view.
Molecule details ›

Search similar proteins

peptide (GLN)(LEU)(SER)(PRO)(PHE)(PRO)(PHE)(ASP)(LEU)
Chain: Q
Length: 9 amino acids
Theoretical weight: 1.06 KDa
peptide (GLN)(LEU)(SER)(PRO)(PHE)(PRO)(PHE)(ASP)(LEU) in PDB entry 2oi9, assembly 1, front view.
peptide (GLN)(LEU)(SER)(PRO)(PHE)(PRO)(PHE)(ASP)(LEU) in PDB entry 2oi9, assembly 1, side view.
peptide (GLN)(LEU)(SER)(PRO)(PHE)(PRO)(PHE)(ASP)(LEU) in PDB entry 2oi9, assembly 1, top view.
Molecule details ›

Search similar proteins

Quick links