The following table provides a list of all the fields available to the Allele Query Tool.
| Field Title | Field Name | Field Description | Data Type |
|---|---|---|---|
| IPD Accession | accession | Unique IPD-IMGT/HLA Identifier e.g. HLA00001. | string |
| Allele Name | name | WHO officially assigned allele name e.g. A*01:01:01:01. Wildcards will be added to the end of the query to that allele groups can be queries e.g A*02:01. | string |
| Locus | locus | Search for all alleles of a specific locus. | enum |
| P Group | wmda.P_group.name | P group alleles shared an identical Antigen Recognition Domain | string |
| G Group | wmda.G_group.name | G group alleles share identical sequence of the exons routeinly sequenced by SBT. Exon 2+3 for class I and exon 2 for class II. | string |
| WHO Assigned Serology | wmda.rel_dna_ser.unambiguous | Details of the unambiguous serology is defined from submissions to the WHO Nomenclature Committee for Factors of the HLA System at the time an allele is submitted for naming, or from the WMDA HLA Dictionary 2008. For Null alleles a value of zero (0) is given and for alleles with no corresponding antigen a question mark (?) is given. | string |
| Aliases | secondary_names | Secondary names for alleles including local names prior to assignment of official allele name and previous official names after renaming. | string |
| Previous Nomenclature | previous_nomenclature | pre-2010 official nomenclature without colons e.g A*01010101. | string |
| Expression Suffix | expression.suffix | Expression suffix for allele name. | string |
| Expression Description | expression.description | Description of mutation causing expression. | string |
| HL7 OID | oid | HL7 Object Identifier. e.g 2.16.840.1.113883.13.252.1.1.1 | string |
| INSDC Accession | insdc.accession | INSDC Database Accession Number. Cross reference for HLA alleles to public sequence repositories. | string |
| Status | status | Status of allele. Can be Public, Confidential or Deleted | enum |
| Reason for deletion | reason_for_deletion | Reason for deletion | string |
| Cells seen in | cell_entries.cell_name | Primary name of cells from which the allele has been sequenced | string |
| Cell IDs | cell_entries.cellid | Unique IPD cell identifier from which the allele has been sequenced | string |
| Ancestry Group | cell_entries.ancestry | enum | |
| KIR Ligand | matching.kir_ligand | KIR-binding epitope | enum |
| Publication Authors | citations.authors | Author names of publications for alleles | string |
| Pubmed ID | citations.pubmed | Unique Pubmed identifiers for publications of alleles | string |
| Publication Year | citations.year | Year of publications of alleles | string |
| Publication Journal | citations.journal | Published Journal | string |
| Publication Details | citations.volume | Publication Details | string |
| CWD Version 2 | cwd.version_2 | Common and well defined status version 2 | enum |
| CWD Version 3 AFA | cwd.version_3.AFA | Common and well defined status version 3 in the population African/African American. | enum |
| CWD Version 3 API | cwd.version_3.API | Common and well defined status version 3 in the population Asian/Pacific Islands. | enum |
| CWD Version 3 EURO | cwd.version_3.EURO | Common and well defined status version 3 in the population European/European descent. | enum |
| CWD Version 3 HIS | cwd.version_3.HIS | Common and well defined status version 3 in the population South or Central America/Hispanic/Latino. | enum |
| CWD Version 3 MENA | cwd.version_3.MENA | Common and well defined status version 3 in the population Middle East/North Coast of Africa. | enum |
| CWD Version 3 NAM | cwd.version_3.NAM | Common and well defined status version 3 in the population Native American. | enum |
| CWD Version 3 UNK | cwd.version_3.UNK | Common and well defined status version 3 in the population unknown/not asked/multiple ancestries/other. | enum |
| CWD Version 3 Total | cwd.version_3.Total | Common and well defined status version 3 Total | enum |
| Dictionary Comments | dictionary.data.comments | Dictionary Comments | string |
| Expert Assigned Type | dictionary.data.expert_assigned | Expert Assigned Type | string |
| Neural Network Assignment | dictionary.data.neural_assigned | Neural Network Assignment | string |
| WHO Assigned Type | dictionary.data.who_assigned | WHO Assigned Type | string |
| Laboratories | confirmation_status.laboratories | Count of submitting laboratories | string |
| Cell Count | confirmation_status.cells | Count of cells sequenced in | string |
| Confirmed | confirmation_status.confirmed | Has the allele been confirmed in more than one cell or from more than one lab | boolean |
| CDS Start | sequence_status.start | Position in the CDS that the sequence starts | string |
| CDS End | sequence_status.end | Position in the CDS that the sequence ends | string |
| Complete CDS | sequence_status.full | If the CDS sequence complete | boolean |
| Assigned Date | date_assigned | Date the allele was assigned | date |
| Last Updated | date_modified | Date the allele was last updated | date |