GDP(3-) (CHEBI:58189)

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CHEBI:58189 - GDP(3−)

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ChEBI ID	CHEBI:58189
ChEBI Name	GDP(3−)
Stars
ASCII Name	GDP(3-)
Definition	A nucleoside 5'-diphosphate(3−) obtained by deprotonation of the three diphosphate OH groups of guanosine 5'-diphosphate (GMP); major species at pH 7.3.
Last Modified	13 March 2017
Downloads	Molfile

Formula	C10H12N5O11P2
Net Charge	-3
Average Mass	440.178
Monoisotopic Mass	440.00250
SMILES	Nc1nc(=O)c2ncn([C@@H]3O[C@H](COP(=O)([O-])OP(=O)([O-])[O-])[C@@H](O)[C@H]3O)c2n1
InChI	InChI=1S/C10H15N5O11P2/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(25-9)1-24-28(22,23)26-27(19,20)21/h2-3,5-6,9,16-17H,1H2,(H,22,23)(H2,19,20,21)(H3,11,13,14,18)/p-3/t3-,5-,6-,9-/m1/s1
InChIKey	QGWNDRXFNXRZMB-UUOKFMHZSA-K

Species of Metabolite	Component	Source	Comments
Homo sapiens (ncbitaxon:9606)	-	DOI (10.1038/nbt.2488)
Saccharomyces cerevisiae (ncbitaxon:4932)	-	PubMed (24678285)	Source: yeast.sf.net

Roles Classification

Biological Roles:

human metabolite Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens).

Saccharomyces cerevisiae metabolite Any fungal metabolite produced during a metabolic reaction in Baker's yeast (Saccharomyces cerevisiae ).

ChEBI Ontology

Outgoing Relation(s)
	GDP(3−) (CHEBI:58189) has role Saccharomyces cerevisiae metabolite (CHEBI:75772)
	GDP(3−) (CHEBI:58189) has role human metabolite (CHEBI:77746)
	GDP(3−) (CHEBI:58189) is a nucleoside 5'-diphosphate(3−) (CHEBI:57930)
	GDP(3−) (CHEBI:58189) is conjugate base of GDP(2−) (CHEBI:65180)
Incoming Relation(s)
	N²-(1-hydroxy-2-oxoethyl)-GDP (CHEBI:141574) has functional parent GDP(3−) (CHEBI:58189)
	N²-(1-hydroxy-2-oxopropyl)-GDP(3−) (CHEBI:141573) has functional parent GDP(3−) (CHEBI:58189)
	N²,N²,N⁷-trimethylguanosine diphosphate (2−) (CHEBI:156463) has functional parent GDP(3−) (CHEBI:58189)
	N²-(ADP-D-ribosyl)-GDP(5−) (CHEBI:142713) has functional parent GDP(3−) (CHEBI:58189)
	GDP(2−) (CHEBI:65180) is conjugate acid of GDP(3−) (CHEBI:58189)

IUPAC Name
5'-O-[(phosphonatooxy)phosphinato]guanosine

Synonyms	Source
GDP trianion	ChEBI
guanosine 5'-diphosphate	ChEBI
guanosine 5'-diphosphate(3−)	ChEBI
guanosine 5'-diphosphate trianion	ChEBI

UniProt Name	Source
GDP	UniProt

Registry Numbers	Sources
Reaxys:4896956	Reaxys

Citations