IHECRE00001860.6 LIVE JSON  


Type Single donor
Status Partial
Project ENCODE
Description Reference epigenome for human DND-41 cell line
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Metadata


Disease ontology curie ncim:C115222
Biomaterial type Cell Line
Disease ontology uri https://nciterms.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C115222
Differentiation stage unknown
Differentiation method unknown
Passage unknown
Medium unknown
Line DND-41
Taxon id 9606
Species Homo sapiens
Disease T-acute lymphoblastic leukemia (T-ALL; type III cortical)
Sample ontology uri http://purl.obolibrary.org/obo/EFO_0007074
Sex Male
Lineage mesoderm
Treatment NA
Batch unknown
Sample ontology curie efo:0007074

Raw data


Assay Type Experiment Type Archive Primary ID Secondary ID URL
DNase-Hypersensitivity Chromatin Accessibility ENCODE ENCSR903SKE None https://www.encodeproject.org/experiments/ENCSR903SKE
ChIP-Seq Histone H3K27me3 ENCODE ENCSR000ASX None https://www.encodeproject.org/experiments/ENCSR000ASX
ChIP-Seq ChIP-Seq Input ENCODE ENCSR000ASA None https://www.encodeproject.org/experiments/ENCSR000ASA
ChIP-Seq Histone H3K36me3 ENCODE ENCSR000AQX None https://www.encodeproject.org/experiments/ENCSR000AQX
ChIP-Seq Histone H3K27ac ENCODE ENCSR000AQW None https://www.encodeproject.org/experiments/ENCSR000AQW
ChIP-Seq Histone H3K4me3 ENCODE ENCSR564VIX None https://www.encodeproject.org/experiments/ENCSR564VIX
ChIP-Seq Histone H3K9me3 ENCODE ENCSR000ARZ None https://www.encodeproject.org/experiments/ENCSR000ARZ
ChIP-Seq Histone H3K4me1 ENCODE ENCSR000AQY None https://www.encodeproject.org/experiments/ENCSR000AQY
ATAC-seq Chromatin Accessibility ENCODE ENCSR660WSB None https://www.encodeproject.org/experiments/ENCSR660WSB
ChIP-Seq Transcription Factor ENCODE ENCSR000AQU None https://www.encodeproject.org/experiments/ENCSR000AQU