IHECRE00001052.6 LIVE JSON
| Type | Composite |
| Status | Partial |
| Project | NIH Roadmap Epigenomics |
| Description | REMC Epigenome (Class 4) for Primary T Helper Memory Cells from Peripheral Blood 2 using donors/samples:20;Donor_100_7_pooled_leukopaks_Jan_7_2011;Donor_101_8_pooled_leukopaks_Jan_20_2011 |
| Previous versions | IHECRE00001052.5 IHECRE00001052.4 IHECRE00001052.3 IHECRE00001052.2 IHECRE00001052.1 |
Metadata
| Disease ontology curie | ncim:C115222 |
| Biomaterial type | Primary Cell Culture |
| Disease ontology uri | https://nciterms.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C115222 |
| Passage if expanded | NA |
| Donor age unit | year |
| Taxon id | 9606 |
| Species | Homo sapiens |
| Disease | healthy |
| Sample ontology uri | http://purl.obolibrary.org/obo/CL_0000897 |
| Donor health status ontology uri | https://nciterms.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C115222 |
| Donor health status ontology curie | ncim:C115222 |
| Treatment | NA |
| Culture conditions | unknown |
| Sample ontology curie | cl:0000897 |
| Cell type | CD4-positive, alpha-beta memory T cell |
| Markers | unknown |
| Donor health status | healthy |
Raw data
| Assay Type | Experiment Type | Archive | Primary ID | Secondary ID | URL |
|---|---|---|---|---|---|
| miRNA-Seq | smRNA-Seq | ENCODE | ENCSR199AQA | None | https://www.encodeproject.org/experiments/ENCSR199AQA |
| ChIP-Seq | Histone H3K4me3 | ENCODE | ENCSR077FZT | None | https://www.encodeproject.org/experiments/ENCSR077FZT |
| ChIP-Seq | Histone H3K4me1 | ENCODE | ENCSR887ESB | None | https://www.encodeproject.org/experiments/ENCSR887ESB |
| ChIP-Seq | Histone H3K27ac | ENCODE | ENCSR724GUS | None | https://www.encodeproject.org/experiments/ENCSR724GUS |
| ChIP-Seq | Histone H3K27me3 | ENCODE | ENCSR702RZM | None | https://www.encodeproject.org/experiments/ENCSR702RZM |
| ChIP-Seq | Histone H3K4me3 | ENCODE | ENCSR807WEO | None | https://www.encodeproject.org/experiments/ENCSR807WEO |
| ChIP-Seq | ChIP-Seq Input | ENCODE | ENCSR919WHB | None | https://www.encodeproject.org/experiments/ENCSR919WHB |
| ChIP-Seq | ChIP-Seq Input | ENCODE | ENCSR405VDU | None | https://www.encodeproject.org/experiments/ENCSR405VDU |
| ChIP-Seq | Histone H3K36me3 | ENCODE | ENCSR580WRV | None | https://www.encodeproject.org/experiments/ENCSR580WRV |
| ChIP-Seq | Histone H3K4me3 | ENCODE | ENCSR223APP | None | https://www.encodeproject.org/experiments/ENCSR223APP |
| ChIP-Seq | Histone H3K9me3 | ENCODE | ENCSR239SNR | None | https://www.encodeproject.org/experiments/ENCSR239SNR |
| ChIP-Seq | ChIP-Seq Input | ENCODE | ENCSR456XCT | None | https://www.encodeproject.org/experiments/ENCSR456XCT |
| ChIP-Seq | Histone H3K9me3 | ENCODE | ENCSR333VFQ | None | https://www.encodeproject.org/experiments/ENCSR333VFQ |