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Ligand clusters for UniProt code Q9WYT9

Ligand clusters for Q9WYT9: Response regulator from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)

Top 6 (of 11) ligand clusters
Cluster 1.
2 ligand types
10 ligands
Cluster 2.
2 ligand types
16 ligands
Cluster 3.
2 ligand types
3 ligands
Cluster 4.
2 ligand types
9 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
9 ligands
Representative protein: 3dgeC  
JSmol
 

Structures

PDB   Schematic diagram
3dgeC    
4javC    
5uhtB    
6rh0C    
6rgzC    
 more ...

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 5uht(B).


 
2. Ligand: SO4 × 9
Sulfate ion
PDB codes: 4ja2(A), 6rfv(C), 6rgy(C), 6rgz(C), 6rh0(C), 6rh1(C), 6rh2(C), 6rh7(C), 6rh8(C).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 5uht(B),


 
2. Ligand: SO4 × 14
Sulfate ion
PDB codes: 6rfv(C), 6rgy(C), 6rgz(C), 6rh0(C), 6rh1(C), 6rh2(C), 6rh7(C), 6rh8(C).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 3gl9(A), 6rh8(C).


 
2. Ligand: ACT × 1
Acetate ion
PDB code: 4ja2(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 4
PDB codes: 3gl9(A), 4ja2(A), 4jas(B), 4jav(C).


 
2. Ligand: SO4 × 5
Sulfate ion
PDB codes: 3dge(C), 6rh1(C), 6rh2(C), 6rh7(C), 6rh8(C).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 5uht(B).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 9
Sulfate ion
PDB codes: 5uht(B), 6rfv(C), 6rgy(C), 6rgz(C), 6rh0(C), 6rh1(C), 6rh2(C), 6rh7(C), 6rh8(C).

 

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