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Ligand clusters for UniProt code Q4Q5S8
Ligand clusters for Q4Q5S8: Glycylpeptide N-tetradecanoyltransferase from Leishmania major
2 ligand clusters
Cluster 1.
53 ligand types
122 ligands
Cluster 2.
1 ligand type
6 ligands
Representative protein: 2wsaA
Structures
PDB
Schematic diagram
2wsa
A
3h5z
A
6qdb
A
4cyn
A
4cyp
A
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Cluster 1 contains 53 ligand types (of which only 20 are listed. Click
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Ligand
Description
_Mg
1. Metal:
_MG × 15
PDB codes:
4c7h
(A),
4c7i
(A),
4cgl
(A),
4cgm
(A),
4cgn
(A),
4cgo
(A),
4cgp
(A),
4cyn
(A),
4cyo
(A),
4cyp
(A),
4cyq
(A),
5a27
(A),
5a28
(A),
5g20
(A),
5g21
(A).
2. Ligand:
DMS × 6
dimethyl sulfoxide
Dimethyl sulfoxide
PDB codes:
4c7h
(A),
4c7i
(A),
5g20
(A),
6qdd
(A).
3. Ligand:
MYA × 46
Tetradecanoyl-Coa
PDB codes:
2wsa
(A),
3h5z
(A),
4a2z
(A),
4a30
(A),
4a31
(A),
4a32
(A),
4a33
(A),
4c7h
(A),
4c7i
(A),
4cgl
(A),
4cgm
(A),
4cgn
(A),
4cgo
(A),
4cgp
(A),
4cyn
(A),
4cyo
(A),
4cyp
(A),
4cyq
(A),
4ucm
(A),
4ucn
(A),
4ucp
(A),
5a27
(A),
5a28
(A),
5ag4
(A),
5ag5
(A),
5ag6
(A),
5ag7
(A),
5age
(A),
5g20
(A),
5g21
(A),
6eu5
(A),
6ewf
(A),
6gnh
(A),
6gns
(A),
6gnt
(A),
6gnu
(A),
6gnv
(A),
6qd9
(A),
6qda
(A),
6qdb
(A),
6qdc
(A),
6qdd
(A),
6qde
(A),
6qdf
(A),
6qdg
(A),
6qdh
(A).
4. Ligand:
6KV × 2
3-[Methyl-[2-[Methyl-(1-Methylpiperidin-4-Yl) amino]thieno[3,2-D]pyrimidin-4-
Yl]amino] propanenitrile
PDB codes:
4cgo
(A),
5. Ligand:
HWQ × 2
3-[Methyl-[2-[Methyl(piperidin-4-Yl)amino]thieno[3,2- D]pyrimidin-4-Yl]amino]propanenitrile
PDB codes:
6qdb
(A),
6. Ligand:
HWW × 2
3-[[6-~{Tert}-Butyl-2-[3-(Dimethylamino)propyl-Methyl- Amino]thieno[3,2-D]pyrimidin-4-Yl]-Methyl-
Amino]propanenitrile
PDB codes:
6qde
(A),
7. Ligand:
HWZ × 2
3-[Methyl-[2-[Methyl-(1-Methylpiperidin-4-Yl) amino]quinazolin-4-Yl]amino]propanenitrile
PDB codes:
6qda
(A),
8. Ligand:
HXE × 2
3-[[2-[(1-Ethylpiperidin-4-Yl)-Methyl-Amino]thieno[3,2- D]pyrimidin-4-Yl]-Methyl-
Amino]propanenitrile
PDB codes:
6qdc
(A),
9. Ligand:
2CB × 1
6-{[2-(4-Methylpiperazin-1-Yl)ethyl]amino}-N-(1,3,5- Trimethyl-1h-Pyrazol-4-Yl)pyridine-3-
Sulfonamide
PDB code:
4a31
(A).
10. Ligand:
2CD × 1
3,5-Dichloro-3'-[(Diethylamino)methyl]-N-(1,3,5- Trimethyl-1h-Pyrazol-4-Yl)biphenyl-4-Sulfonamide
PDB code:
4a32
(A).
11. Ligand:
31A × 1
N-[2-(3-Methoxyphenyl)ethanimidoyl]-2-Piperidin-4- Yloxy-Benzamide
PDB code:
6ewf
(A).
12. Ligand:
5PE × 1
(2r)-2-(4-Hydroxy-3-Methoxyphenyl)-3- (Pyridin-2-Ylmethyl)-1,3-Thiazolidin-4-One
PDB code:
5ag6
(A).
13. Ligand:
646 × 1
2,6-Dichloro-4-(2-Piperazin-1-Ylpyridin-4-Yl) -N-(1,3,5-Trimethyl-1h-Pyrazol-4-
Yl) benzenesulfonamide
PDB code:
2wsa
(A).
14. Ligand:
7AH × 1
2-(4-Fluorophenyl)-N-(3-Piperidin-4-Yl-1h- Indol-5-Yl)ethanamide
PDB code:
4cgn
(A).
15. Ligand:
9X3 × 1
N-Methyl-1-[3-(Morpholin-4-Ylmethyl)phenyl] methanamine
PDB code:
4ucp
(A).
16. Ligand:
A62 × 1
(3r)-4-(4-Chlorophenyl)-1-[(3s,4r)-3-(4- Chlorophenyl)-4-(Hydroxymethyl)pyrrolidin-1-Yl]-3-
Hydroxybutan-1-One
PDB code:
4cyp
(A).
17. Ligand:
A6K × 1
(3r)-3-Azanyl-4-(4-Chlorophenyl)-1-[(3s,4r)- 3-(4-Chlorophenyl)-4-(Hydroxymethyl) pyrrolidin-1-
Yl]butan-1-One
PDB code:
4cgl
(A).
18. Ligand:
A6M × 1
(3r)-3-Amino-4-(4-Chlorophenyl)-1-[(3r,4s)-3- (4-Chlorophenyl)-4-(Hydroxymethyl)pyrrolidin- 1-
Yl]butan-1-One
PDB code:
4cyn
(A).
19. Ligand:
BXN × 1
4-[3-[(8~{a}~{r})-3,4,6,7,8,8~{a}-Hexahydro-1~{h}- Pyrrolo[1,2-A]pyrazin-2-Yl]propyl]-2,6-
Bis(chloranyl)- ~{N}-Methyl-~{N}-(1,3,5-Trimethylpyrazol-4-Yl) benzenesulfonamide
PDB code:
6eu5
(A).
20. Ligand:
COA × 1
Coenzyme a
PDB code:
4c7h
(A).
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Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 6
glycerin
Glycerol
PDB codes:
4a2z
(A),
4a30
(A),
4a31
(A),
4a32
(A),
6gnt
(A),
6gnv
(A).