Ligand clusters for UniProt code Q48935

Ligand clusters for Q48935: Acetylpolyamine amidohydrolase from Mycoplana ramosa

		Top 6 (of 21) ligand clusters Cluster 1. 12 ligand types 22 ligands Cluster 2. 7 ligand types 7 ligands Cluster 3. 2 ligand types 3 ligands Cluster 4. 2 ligand types 7 ligands Cluster 5. 1 ligand type 6 ligands Cluster 6. 1 ligand type 1 ligand
Representative protein: 3q9bA

Structures

PDB		Schematic diagram
3q9bA
3q9cA
4zunA
4zupA
3q9fA
		more ...

Cluster 1 contains 12 ligand types

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Ligand		Description
_Zn		1. Metal: _ZN × 11 PDB codes: 3q9b(A), 3q9c(A), 3q9e(A), 3q9f(A), 4zum(A), 4zun(A), 4zuo(A), 4zup(A), 4zuq(A), 4zur(A).
		2. Ligand: DMS × 1 dimethyl sulfoxide Dimethyl sulfoxide PDB code: 3q9b(A).
		3. Ligand: 5XA × 1 5-Amino-N-Hydroxypentanamide PDB code: 4zup(A).
		4. Ligand: 6XA × 1 6-Amino-N-Hydroxyhexanamide PDB code: 4zuq(A).
		5. Ligand: 7XA × 1 7-Amino-N-Hydroxyheptanamide PDB code: 4zur(A).
		6. Ligand: B3N × 1 4-(Dimethylamino)-N-[7-(Hydroxyamino)-7- Oxoheptyl]benzamide PDB code: 3q9b(A).
		7. Ligand: CXS × 1 3-Cyclohexyl-1-Propylsulfonic acid PDB code: 3q9f(A).
		8. Ligand: FKS × 1 7-[(3-Aminopropyl)amino]-1,1,1-Trifluoroheptane-2,2- Diol PDB code: 4zum(A).
		9. Ligand: Q9C × 1 N-{4-[(3-Aminopropyl)amino]butyl}acetamide PDB code: 3q9c(A).
		10. Ligand: SP5 × 1 N-[3-({4-[(3-Aminopropyl)amino]butyl}amino) propyl]acetamide PDB code: 3q9e(A).
		11. Ligand: SS9 × 1 5-[(3-Aminopropyl)amino]pentane-1-Thiol PDB code: 4zun(A).
		12. Ligand: XS6 × 1 6-[(3-Aminopropyl)amino]-N-Hydroxyhexanamide PDB code: 4zuo(A).

Cluster 2 contains 7 ligand types

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Ligand		Description
		1. Ligand: DMS × 1 dimethyl sulfoxide Dimethyl sulfoxide PDB code: 3q9b(A).
		2. Ligand: 7XA × 1 7-Amino-N-Hydroxyheptanamide PDB code: 4zur(A).
		3. Ligand: FKS × 1 7-[(3-Aminopropyl)amino]-1,1,1-Trifluoroheptane-2,2- Diol PDB code: 4zum(A).
		4. Ligand: Q9C × 1 N-{4-[(3-Aminopropyl)amino]butyl}acetamide PDB code: 3q9c(A).
		5. Ligand: SP5 × 1 N-[3-({4-[(3-Aminopropyl)amino]butyl}amino) propyl]acetamide PDB code: 3q9e(A).
		6. Ligand: SS9 × 1 5-[(3-Aminopropyl)amino]pentane-1-Thiol PDB code: 4zun(A).
		7. Ligand: XS6 × 1 6-[(3-Aminopropyl)amino]-N-Hydroxyhexanamide PDB code: 4zuo(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 2 glycerin Glycerol PDB codes: 4zuo(A), 4zuq(A).
		2. Ligand: DMS × 1 dimethyl sulfoxide Dimethyl sulfoxide PDB code: 3q9b(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 6 glycerin Glycerol PDB codes: 4zum(A), 4zun(A), 4zuo(A), 4zup(A), 4zuq(A), 4zur(A).
		2. Ligand: DMS × 1 dimethyl sulfoxide Dimethyl sulfoxide PDB code: 3q9b(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 6 glycerin Glycerol PDB codes: 4zum(A), 4zun(A), 4zuo(A), 4zup(A), 4zuq(A), 4zur(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 4zup(A).