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Ligand clusters for UniProt code Q41038
Ligand clusters for Q41038: Chlorophyll a-b binding protein, chloroplastic from Pisum sativum
4 ligand clusters
Cluster 1.
10 ligand types
230 ligands
Cluster 2.
1 ligand type
4 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
3 ligands
Representative protein: 5l8r2
Structures
PDB
Schematic diagram
5l8r
2
6yac
2
4xk8
2
6yez
2
7dkz
2
more ...
Cluster 1 contains 10 ligand types
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Ligand
Description
1. Ligand:
LUT × 9
lutein
(3r,3'R,6s)-4,5-Didehydro-5,6-Dihydro-Beta,Beta- Carotene-3,3'-Diol
PDB codes:
4rku
(2),
4xk8
(2),
4y28
(2),
5l8r
(2),
6yac
(2),
6yez
(2),
7dkz
(2).
2. Ligand:
BCR × 5
beta carotene
Beta-Carotene
PDB codes:
4xk8
(2),
5l8r
(2),
6yac
(2),
6yez
(2),
7dkz
(2).
3. Ligand:
CLA × 155
Chlorophyll a
PDB codes:
2o01
(2),
2wsc
(2),
2wse
(2),
2wsf
(2),
3lw5
(2),
4rku
(2),
4xk8
(2),
4y28
(2),
5l8r
(2),
6yac
(2),
6yez
(2),
7dkz
(2),
4. Ligand:
CHL × 28
Chlorophyll b
PDB codes:
4xk8
(2),
4y28
(2),
5l8r
(2),
6yac
(2),
6yez
(2),
7dkz
(2),
5. Ligand:
LMG × 17
1,2-Distearoyl-Monogalactosyl-Diglyceride
PDB codes:
4y28
(2),
5l8r
(2),
6yac
(2),
6yez
(2),
6. Ligand:
LHG × 7
1,2-Dipalmitoyl-Phosphatidyl-Glycerole
PDB codes:
4xk8
(2),
4y28
(2),
5l8r
(2),
6yac
(2),
6yez
(2),
7dkz
(2).
7. Ligand:
XAT × 5
(3s,5r,6s,3'S,5'R,6'S)-5,6,5',6'-Diepoxy-5,6,5',6'- Tetrahydro-Beta,Beta-Carotene-3,3'-Diol
PDB codes:
4xk8
(2),
5l8r
(2),
6yac
(2),
6yez
(2),
7dkz
(2).
8. Ligand:
DGD × 2
Digalactosyl diacyl glycerol (dgdg)
PDB codes:
5l8r
(2),
6yac
(2).
9. Ligand:
3PH × 1
1,2-Diacyl-Glycerol-3-Sn-Phosphate
PDB code:
6yez
(2).
10. Ligand:
LMT × 1
Dodecyl-Beta-D-Maltoside
PDB code:
7dkz
(2).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
LMU × 4
Dodecyl-Alpha-D-Maltoside
PDB codes:
2wsc
(2),
2wse
(2),
2wsf
(2),
3lw5
(2).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
LMT × 1
Dodecyl-Beta-D-Maltoside
PDB code:
5l8r
(2).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GLC-FRU × 3
GLC
=Alpha-D-Glucopyranose,
FRU
=Beta-D-Fructofuranose.
PDB codes:
2wsc
(2),
2wse
(2),
2wsf
(2).