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Ligand clusters for UniProt code Q41038

Ligand clusters for Q41038: Chlorophyll a-b binding protein, chloroplastic from Pisum sativum

4 ligand clusters
Cluster 1.
10 ligand types
230 ligands
Cluster 2.
1 ligand type
4 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
3 ligands
Representative protein: 5l8r2  
JSmol
 

Structures

PDB   Schematic diagram
5l8r2    
6yac2    
4xk82    
6yez2    
7dkz2    
 more ...

 

 Cluster 1 contains 10 ligand types

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Ligand Description


 
1. Ligand: LUT × 9
lutein
(3r,3'R,6s)-4,5-Didehydro-5,6-Dihydro-Beta,Beta- Carotene-3,3'-Diol
PDB codes: 4rku(2), 4xk8(2), 4y28(2), 5l8r(2), 6yac(2), 6yez(2), 7dkz(2).


 
2. Ligand: BCR × 5
beta carotene
Beta-Carotene
PDB codes: 4xk8(2), 5l8r(2), 6yac(2), 6yez(2), 7dkz(2).


 
3. Ligand: CLA × 155
Chlorophyll a
PDB codes: 2o01(2), 2wsc(2), 2wse(2), 2wsf(2), 3lw5(2), 4rku(2), 4xk8(2), 4y28(2), 5l8r(2), 6yac(2), 6yez(2), 7dkz(2),


 
4. Ligand: CHL × 28
Chlorophyll b
PDB codes: 4xk8(2), 4y28(2), 5l8r(2), 6yac(2), 6yez(2), 7dkz(2),


 
5. Ligand: LMG × 17
1,2-Distearoyl-Monogalactosyl-Diglyceride
PDB codes: 4y28(2), 5l8r(2), 6yac(2), 6yez(2),


 
6. Ligand: LHG × 7
1,2-Dipalmitoyl-Phosphatidyl-Glycerole
PDB codes: 4xk8(2), 4y28(2), 5l8r(2), 6yac(2), 6yez(2), 7dkz(2).


 
7. Ligand: XAT × 5
(3s,5r,6s,3'S,5'R,6'S)-5,6,5',6'-Diepoxy-5,6,5',6'- Tetrahydro-Beta,Beta-Carotene-3,3'-Diol
PDB codes: 4xk8(2), 5l8r(2), 6yac(2), 6yez(2), 7dkz(2).


 
8. Ligand: DGD × 2
Digalactosyl diacyl glycerol (dgdg)
PDB codes: 5l8r(2), 6yac(2).


 
9. Ligand: 3PH × 1
1,2-Diacyl-Glycerol-3-Sn-Phosphate
PDB code: 6yez(2).


 
10. Ligand: LMT × 1
Dodecyl-Beta-D-Maltoside
PDB code: 7dkz(2).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: LMU × 4
Dodecyl-Alpha-D-Maltoside
PDB codes: 2wsc(2), 2wse(2), 2wsf(2), 3lw5(2).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: LMT × 1
Dodecyl-Beta-D-Maltoside
PDB code: 5l8r(2).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GLC-FRU × 3
GLC=Alpha-D-Glucopyranose, FRU=Beta-D-Fructofuranose.
PDB codes: 2wsc(2), 2wse(2), 2wsf(2).

 

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