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Ligand clusters for UniProt code P22259
Ligand clusters for P22259: Phosphoenolpyruvate carboxykinase (ATP) from Escherichia coli (strain K12)
6 ligand clusters
Cluster 1.
13 ligand types
55 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1os1A
Structures
PDB
Schematic diagram
1os1
A
2py7
X
6v2l
A
1ayl
A
6crt
A
more ...
Cluster 1 contains 13 ligand types
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Ligand
Description
1. Ligand:
ATP × 5
Adenosine-5'-Triphosphate
PDB codes:
1aq2
(A),
1ayl
(A),
1os1
(A),
2olq
(A),
2olr
(A).
_Mn
2. Metal:
_MN × 11
PDB codes:
1aq2
(A),
2olq
(A),
2pxz
(X),
2py7
(X),
6asi
(A),
6asm
(A),
6at2
(A),
6crt
(A),
6v2l
(A),
_Mg
3. Metal:
_MG × 10
PDB codes:
1k3c
(A),
1k3d
(A),
1os1
(A),
2olq
(A),
2olr
(A),
2pxz
(X),
2py7
(X),
6asi
(A),
6asm
(A),
6at2
(A).
4. Ligand:
PYR × 4
pyruvic acid
Pyruvic acid
PDB codes:
1aq2
(A),
1k3c
(A),
1os1
(A),
6com
(A).
5. Ligand:
OXL × 1
Oxalate ion
PDB code:
1ayl
(A).
6. Ligand:
ATP × 9
Adenosine-5'-Triphosphate
PDB codes:
2pxz
(X),
2py7
(X),
6asi
(A),
6asm
(A),
6at2
(A),
6com
(A),
6crt
(A),
6v2l
(A),
6v2m
(A).
7. Ligand:
THJ × 5
Thiosulfate
PDB codes:
6asm
(A),
6at2
(A),
6at3
(A),
6at4
(A),
8. Ligand:
03S × 2
Methanesulfonic acid
PDB codes:
6asi
(A),
6asn
(A).
9. Ligand:
ACT × 2
Acetate ion
PDB codes:
6v2l
(A),
6v2n
(A).
10. Ligand:
ADP-AF3 × 2
ADP
=Adenosine-5'-Diphosphate,
AF3
=Aluminum fluoride.
PDB codes:
1k3c
(A),
1k3d
(A).
11. Ligand:
OAA × 2
Oxaloacetate ion
PDB codes:
2pxz
(X),
6at3
(A).
12. Ligand:
SO4 × 1
Sulfate ion
PDB code:
6asn
(A).
_Ca
13. Metal:
_CA × 1
PDB code:
1os1
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code:
6at2
(A).
2. Ligand:
BTB × 1
2-[Bis-(2-Hydroxy-Ethyl)-Amino]-2-Hydroxymethyl- Propane-1,3-Diol
PDB code:
6asm
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
6asn
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
6asn
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
THJ × 1
Thiosulfate
PDB code:
6at4
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Mn
1. Metal:
_MN × 1
PDB code:
2py7
(X).