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Ligand clusters for UniProt code P17301

Ligand clusters for P17301: Integrin alpha-2 from Homo sapiens

Top 6 (of 16) ligand clusters
Cluster 1.
13 ligand types
37 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5hj2C  
JSmol
 

Structures

PDB   Schematic diagram
5hj2C    
6nd8C    
6ndhC    
6nd9C    
6ndcC    
 more ...

 

 Cluster 1 contains 13 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 3
PDB codes: 4bj3(A), 5thp(C),

_Mn
 
2. Metal: _MN × 2
PDB codes: 1v7p(C), 6ndd(C).

_Zn
 
3. Metal: _ZN × 1
PDB code: 6ndh(C).


 
4. Ligand: SO4 × 12
Sulfate ion
PDB codes: 5thp(R), 6nd8(C), 6nd9(C), 6nda(C), 6ndb(C), 6ndc(C), 6ndd(C), 6nde(C), 6ndf(C), 6ndg(C), 6ndh(C).

_Na
 
5. Metal: _NA × 9
PDB codes: 6nd8(C), 6nd9(C), 6nda(C), 6ndb(C), 6ndc(C), 6ndd(C), 6ndf(C), 6ndg(C), 6ndh(C).

_Ca
 
6. Metal: _CA × 2
PDB codes: 5hj2(C), 6nd9(C).

_Co
 
7. Metal: _CO × 2
PDB codes: 1dzi(A), 6ndb(C).

_Ba
 
8. Metal: _BA × 1
PDB code: 6nd8(C).

_Cd
 
9. Metal: _CD × 1
PDB code: 6nda(C).

_Cr
 
10. Metal: _CR × 1
PDB code: 6ndc(C).

_Pr
 
11. Metal: _PR × 1
PDB code: 6nde(C).

_Sr
 
12. Metal: _SR × 1
PDB code: 6ndf(C).

_Y1
 
13. Metal: _Y1 × 1
PDB code: 6ndg(C).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 5thp(C).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 6nd9(C).

_Cl
 
2. Metal: _CL × 1
PDB code: 6nd8(C).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

_Cl
 
1. Metal: _CL × 1
PDB code: 4bj3(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Na
 
1. Metal: _NA × 1
PDB code: 5thp(C).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Na
 
1. Metal: _NA × 1
PDB code: 5thp(C).

 

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