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Ligand clusters for UniProt code P06968
Ligand clusters for P06968: Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Escherichia coli (strain K12) OX=83333 GN=dut PE=1 SV=2
Top 6 (of 8) ligand clusters
Cluster 1.
6 ligand types
13 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
4 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 6hdeA
Structures
PDB
Schematic diagram
6hde
A
1eu5
A
1dud
A
2hrm
A
1seh
A
more ...
Cluster 1 contains 6 ligand types
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Ligand
Description
1. Ligand:
DUT × 1
Deoxyuridine-5'-Triphosphate
PDB code:
1syl
(A).
2. Ligand:
UMP × 1
2'-Deoxyuridine 5'-Monophosphate
PDB code:
1seh
(A).
3. Ligand:
GOL × 4
glycerin
Glycerol
PDB codes:
1eu5
(A),
1euw
(A),
4. Ligand:
DUD × 2
Deoxyuridine-5'-Diphosphate
PDB codes:
1dud
(A),
2hr6
(A).
5. Ligand:
UC5 × 1
2'-Deoxy-5'-O-[(S)-Hydroxy(phosphonomethyl) phosphoryl]uridine
PDB code:
2hrm
(A).
6. Ligand:
DUP × 4
2'-Deoxyuridine 5'-Alpha,Beta-Imido-Triphosphate
PDB codes:
1rn8
(A),
1rnj
(A),
6hde
(A),
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
DUP × 2
2'-Deoxyuridine 5'-Alpha,Beta-Imido-Triphosphate
PDB codes:
6hde
(A),
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
DUP × 1
2'-Deoxyuridine 5'-Alpha,Beta-Imido-Triphosphate
PDB code:
6hde
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACT × 1
Acetate ion
PDB code:
1rn8
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
TRS × 4
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB codes:
1rn8
(A),
1rnj
(A),
1seh
(A),
1syl
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code:
1rnj
(A).