Ligand clusters for UniProt code P00727

Ligand clusters for P00727: Cytosol aminopeptidase OS=Bos taurus GN=LAP3 PE=1 SV=3

		Top 6 (of 8) ligand clusters Cluster 1. 10 ligand types 27 ligands Cluster 2. 2 ligand types 5 ligands Cluster 3. 2 ligand types 5 ligands Cluster 4. 2 ligand types 5 ligands Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 2ewbA

Structures

PDB		Schematic diagram
2ewbA
1lanA
2j9aA
1lamA
1lcpA
		more ...

Cluster 1 contains 10 ligand types

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Ligand		Description
_Zn		1. Metal: _ZN × 17 PDB codes: 1bll(E), 1bpm(A), 1bpn(A), 1lam(A), 1lan(A), 1lap(A), 1lcp(A), 2ewb(A), 2j9a(A),
		2. Ligand: LEU × 1 PDB code: 1lan(A).
		3. Ligand: AHY × 1 (2s,3r)-3-Amino-2-Hydroxydecanoic acid PDB code: 2j9a(A).
		4. Ligand: PLU × 1 Leucine phosphonic acid PDB code: 1lcp(A).
		5. Ligand: ZED × 1 L-Proline, 1-[(2s)-3-Mercapto-2-Methyl-1-Oxopropyl]-4- (Phenylthio)-, 4s PDB code: 2ewb(A).
		6. Ligand: CO3 × 2 Carbonate ion PDB codes: 1lam(A), 2ewb(A).
		7. Ligand: ALA-MLE-TYR-TYR × 1 MLE=N-Methylleucine. PDB code: 2j9a(A).
		8. Ligand: L2O-VAL-VAL-ASP × 1 L2O=(2s,3r)-3-Amino-2-Hydroxy-5-Methylhexanoic acid. PDB code: 1bll(E).
_Cl		9. Metal: _CL × 1 PDB code: 2j9a(A).
_Mg		10. Metal: _MG × 1 PDB code: 1bpm(A).

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: MRD × 3 (4r)-2-Methylpentane-2,4-Diol PDB codes: 1lam(A), 1lan(A), 1lcp(A).
		2. Ligand: MPD × 2 (4s)-2-Methyl-2,4-Pentanediol PDB codes: 2ewb(A), 2j9a(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: MRD × 3 (4r)-2-Methylpentane-2,4-Diol PDB codes: 1lam(A), 1lan(A), 1lcp(A).
		2. Ligand: MPD × 2 (4s)-2-Methyl-2,4-Pentanediol PDB codes: 2ewb(A), 2j9a(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: MRD × 3 (4r)-2-Methylpentane-2,4-Diol PDB codes: 1lam(A), 1lan(A), 1lcp(A).
		2. Ligand: MPD × 2 (4s)-2-Methyl-2,4-Pentanediol PDB codes: 2ewb(A), 2j9a(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: MPD × 1 (4s)-2-Methyl-2,4-Pentanediol PDB code: 2ewb(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: DMS × 1 dimethyl sulfoxide Dimethyl sulfoxide PDB code: 2j9a(A).