Ligand clusters for UniProt code O28126

Ligand clusters for O28126: CCA-adding enzyme OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=cca PE=1 SV=1

		Top 6 (of 29) ligand clusters Cluster 1. 11 ligand types 68 ligands Cluster 2. 5 ligand types 7 ligands Cluster 3. 4 ligand types 5 ligands Cluster 4. 3 ligand types 4 ligands Cluster 5. 3 ligand types 4 ligands Cluster 6. 2 ligand types 3 ligands
Representative protein: 4x4qA

Structures

PDB		Schematic diagram
4x4qA
4x4vA
4x4rA
3ov7A
3ouyA
		more ...

Cluster 1 contains 11 ligand types

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Ligand		Description
		1. Ligand: CTP × 5 Cytidine-5'-Triphosphate PDB codes: 1r89(A), 1tfy(A), 1ueu(A), 2dr8(A), 2dvi(A).
		2. Ligand: ATP × 6 adenosine triphosphate Adenosine-5'-Triphosphate PDB codes: 1r8b(A), 1uev(A), 2dra(A), 2zh6(A), 3ov7(A), 3ovb(A).
		3. Ligand: UTP × 1 Uridine 5'-Triphosphate PDB code: 1r8c(A).
_Mg		4. Metal: _MG × 20 PDB codes: 1r89(A), 1r8b(A), 1tfy(A), 1uet(A), 1ueu(A), 1uev(A), 2dr8(A), 2dra(A), 2dvi(A), 2zh6(A), 2zha(A), 3ova(A), 3ovb(A), 4x4q(A), 4x4r(A), 4x4s(A), 4x4v(A).
		5. Ligand: SO4 × 14 Sulfate ion PDB codes: 2dr5(A), 2dr7(A), 2dr9(A), 2drb(A), 2zh1(A), 2zh2(A), 2zh3(A), 2zh4(A), 2zh5(A), 2zh7(A), 2zh8(A), 2zh9(A), 2zhb(A), 4x4n(A).
		6. Ligand: CTP × 5 Cytidine-5'-Triphosphate PDB codes: 2zha(A), 3ovs(A), 4x4o(A), 4x4q(A), 4x4s(A).
_Mn		7. Metal: _MN × 9 PDB codes: 1r89(A), 1r8a(A), 1r8b(A), 1r8c(A), 3ov7(A), 4x4o(A).
		8. Ligand: APC × 4 Diphosphomethylphosphonic acid adenosyl ester PDB codes: 3ova(A), 4x4r(A), 4x4u(A), 4x4v(A).
		9. Ligand: POP × 2 Pyrophosphate 2- PDB codes: 3ouy(A), 3ovb(A).
_Ca		10. Metal: _CA × 1 PDB code: 3ovs(A).
_Cl		11. Metal: _CL × 1 PDB code: 1r89(A).

Cluster 2 contains 5 ligand types

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Ligand		Description
		1. Ligand: CTP × 1 Cytidine-5'-Triphosphate PDB code: 1r89(A).
		2. Ligand: ATP × 1 adenosine triphosphate Adenosine-5'-Triphosphate PDB code: 1r8b(A).
		3. Ligand: UTP × 1 Uridine 5'-Triphosphate PDB code: 1r8c(A).
_Mn		4. Metal: _MN × 3 PDB codes: 1r89(A), 1r8b(A), 1r8c(A).
		5. Ligand: TAR × 1 D(-)-Tartaric acid PDB code: 4x4v(A).

Cluster 3 contains 4 ligand types

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Ligand		Description
		1. Ligand: __G-__G × 2 PDB codes: 4x4t(A), 4x4u(A).
		2. Ligand: 5GP × 1 Guanosine-5'-Monophosphate PDB code: 4x4v(A).
		3. Ligand: GMP × 1 Guanosine PDB code: 4x4n(A).
		4. Ligand: GOL × 1 Glycerol PDB code: 4x4u(A).

Cluster 4 contains 3 ligand types

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Ligand		Description
		1. Ligand: MES × 2 2-(N-Morpholino)-Ethanesulfonic acid PDB codes: 4x4r(A), 4x4v(A).
		2. Ligand: GOL × 1 Glycerol PDB code: 4x4q(A).
		3. Ligand: SO4 × 1 Sulfate ion PDB code: 3ovs(A).

Cluster 5 contains 3 ligand types

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Ligand		Description
		1. Ligand: GOL × 2 Glycerol PDB codes: 4x4t(A), 4x4u(A).
		2. Ligand: EDO × 1 1,2-Ethanediol PDB code: 3ovs(A).
		3. Ligand: TAR × 1 D(-)-Tartaric acid PDB code: 4x4v(A).

Cluster 6 contains 2 ligand types

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Ligand		Description
		1. Ligand: TAR × 2 D(-)-Tartaric acid PDB codes: 4x4r(A), 4x4s(A).
		2. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 4x4q(A).