Relative solvent accessibilty of Thiamine diphosphate in protein structures
The avaerage solvent accessibility of a cofactor in the biological assembly
provides information on how the cofactor is bound to the protein. The variance
of the solvent accessibility tells us how conserved this binding mode is. Below
you will find pictures of Thiamine diphosphate with color coded average
(0%=red - white - blue>=25%) and variance (0%=yellow - white - green>=25%) of
relavtive solvent accessibility. To compute these values, naccess has been run on the
biological assembly of all structures with this cofactor.
Average RSA and standard deviation for HET code TDP
The average and standard deviation has been calculated on 33 structures.
Legend
| Average | Variance |
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Average RSA and standard deviation for HET code TPP
The average and standard deviation has been calculated on 58 structures.
Legend
| Average | Variance |
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