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Crystal structure of N-terminal domain of human protein O-mannose beta-1,2-N-acetylglucosaminyltransferase in complex with Man-beta-pNP

X-ray diffraction
1.3Å resolution
PDB entry 5ggk coloured by chain, front view.
PDB entry 5ggk coloured by chain, side view.
PDB entry 5ggk coloured by chain, top view.
Source organism: Homo sapiens
Assembly composition:
monomeric (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1
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Multimeric state: monomeric
Accessible surface area: 7528.49 Å2
Buried surface area: 839.53 Å2
Dissociation area: 112.8 Å2
Dissociation energy (ΔGdiss): -3.35 kcal/mol
Dissociation entropy (TΔSdiss): -0.29 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-186815
Assembly 2
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Assembly Name: Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1
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Multimeric state: monomeric
Accessible surface area: 7505.43 Å2
Buried surface area: 453.49 Å2
Dissociation area: 104.69 Å2
Dissociation energy (ΔGdiss): -4.98 kcal/mol
Dissociation entropy (TΔSdiss): 1.23 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-186815

Macromolecules

Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1
Chains: A, B
Length: 164 amino acids
Theoretical weight: 17.62 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8WZA1 (Residues: 92-250; Coverage: 24%)
Gene names: MGAT1.2, POMGNT1, UNQ746/PRO1475
Pfam: Interleukin-like EMT inducer
InterPro:
Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 in PDB entry 5ggk, assembly 1, front view.
Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 in PDB entry 5ggk, assembly 1, side view.
Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 in PDB entry 5ggk, assembly 1, top view.
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