› 2o14

X-ray diffraction
2.1Å resolution

X-Ray Crystal Structure of Protein YXIM_BACsu from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR595

Released:
DOI: 10.2210/pdb2o14/pdb
PDB entry 2o14 coloured by chain, front view.
PDB entry 2o14 coloured by chain, side view.
PDB entry 2o14 coloured by chain, top view.
Source organism: Bacillus subtilis
Entry authors: Kuzin AP, Chen Y, Seetharaman J, Chen CX, Fang Y, Cunningham K, Ma L-C, Xiao R, Liu J, Baran MC, Acton TB, Rost B, Montelione G, Hunt JF, Tong L, Northeast Structural Genomics Consortium (NESG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-154602 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Uncharacterized esterase YxiM Chain: A
Molecule details ›
Chain: A
Length: 375 amino acids
Theoretical weight: 41.64 KDa
Source organism: Bacillus subtilis
Expression system: Escherichia coli
UniProt:
  • Canonical: P42304 (Residues: 17-382; Coverage: 100%)
Gene names: BSU39120, SS8D, yxiM
Sequence domains:
Structure domains:

Ligands and Environments

2 bound ligands:
Ligand MN 1 x MN
Ligand SO4 1 x SO4
1 modified residue:
Ligand MSE 10 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X4A
Spacegroup: C2
Unit cell:
a: 85.425Å b: 59.774Å c: 92.388Å
α: 90° β: 100.34° γ: 90°
R-values:
R R work R free
0.189 0.189 0.205
Expression system: Escherichia coli

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