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Crystal Structure of the C-terminal Domain of S. cerevisiae eIF5

X-ray diffraction
1.5Å resolution
PDB entry 2ful coloured by chain, front view.
PDB entry 2ful coloured by chain, side view.
PDB entry 2ful coloured by chain, top view.
Source organism: Saccharomyces cerevisiae
Assembly composition:
monomeric (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1
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Assembly Name: Eukaryotic translation initiation factor 5
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Multimeric state: monomeric
Accessible surface area: 9172.0 Å2
Buried surface area: 371.42 Å2
Dissociation area: 58.43 Å2
Dissociation energy (ΔGdiss): 8.19 kcal/mol
Dissociation entropy (TΔSdiss): 0.58 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-153652
Assembly 2 (preferred)
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Assembly Name: Eukaryotic translation initiation factor 5
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Multimeric state: monomeric
Accessible surface area: 8458.74 Å2
Buried surface area: 277.22 Å2
Dissociation area: 61.24 Å2
Dissociation energy (ΔGdiss): 8.62 kcal/mol
Dissociation entropy (TΔSdiss): 0.58 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-153652
Assembly 3
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Assembly Name: Eukaryotic translation initiation factor 5
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Multimeric state: monomeric
Accessible surface area: 9455.05 Å2
Buried surface area: 251.73 Å2
Dissociation area: 59.68 Å2
Dissociation energy (ΔGdiss): 8.21 kcal/mol
Dissociation entropy (TΔSdiss): 0.58 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-153652
Assembly 4
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Assembly Name: Eukaryotic translation initiation factor 5
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Multimeric state: monomeric
Accessible surface area: 9389.39 Å2
Buried surface area: 701.82 Å2
Dissociation area: 60.06 Å2
Dissociation energy (ΔGdiss): 8.48 kcal/mol
Dissociation entropy (TΔSdiss): 0.58 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-153652
Assembly 5
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Assembly Name: Eukaryotic translation initiation factor 5
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Multimeric state: monomeric
Accessible surface area: 9796.56 Å2
Buried surface area: 536.17 Å2
Dissociation area: 59.75 Å2
Dissociation energy (ΔGdiss): 8.42 kcal/mol
Dissociation entropy (TΔSdiss): 0.58 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-153652
Assembly 6
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Assembly Name: Eukaryotic translation initiation factor 5
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Multimeric state: monomeric
Accessible surface area: 9282.52 Å2
Buried surface area: 531.89 Å2
Dissociation area: 62.07 Å2
Dissociation energy (ΔGdiss): 8.25 kcal/mol
Dissociation entropy (TΔSdiss): 0.58 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-153652

Macromolecules

Eukaryotic translation initiation factor 5
Chains: A, B, C, D, E, F
Length: 177 amino acids
Theoretical weight: 20.41 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P38431 (Residues: 241-405; Coverage: 41%)
Gene names: TIF5, YP3085.05, YPR041W
Pfam: eIF4-gamma/eIF5/eIF2-epsilon
InterPro:
CATH: Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
Eukaryotic translation initiation factor 5 in PDB entry 2ful, assembly 2, front view.
Eukaryotic translation initiation factor 5 in PDB entry 2ful, assembly 2, side view.
Eukaryotic translation initiation factor 5 in PDB entry 2ful, assembly 2, top view.
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