2xhl

X-ray diffraction
2.8Å resolution

Structure of a functional derivative of Clostridium botulinum neurotoxin type B

Released:

Function and Biology Details

Reaction catalysed:
Limited hydrolysis of proteins of the neuroexocytosis apparatus, synaptobrevin (also known as neuronal vesicle-associated membrane protein, VAMP), synaptosome-associated protein of 25 kDa (SNAP25) or syntaxin. No detected action on small molecule substrates.
Biological process:
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-145486 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Botulinum neurotoxin B light chain Chain: A
Molecule details ›
Chain: A
Length: 453 amino acids
Theoretical weight: 52.29 KDa
Source organism: Clostridium botulinum
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: P10844 (Residues: 1-437; Coverage: 34%)
Gene name: botB
Sequence domains: Clostridial neurotoxin zinc protease
Structure domains: Metalloproteases ("zincins"), catalytic domain like
Botulinum neurotoxin B heavy chain Chain: B
Molecule details ›
Chain: B
Length: 433 amino acids
Theoretical weight: 49.76 KDa
Source organism: Clostridium botulinum
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: P10844 (Residues: 446-858; Coverage: 32%)
Gene name: botB
Sequence domains: Clostridium neurotoxin, Translocation domain
Structure domains: Clostridium botulinum neurotoxin b, "coiled-coil" domain

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I03
Spacegroup: P21212
Unit cell:
a: 66.89Å b: 149.1Å c: 113.49Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.242 0.24 0.282
Expression system: Escherichia coli BL21