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EBI
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PDBsum
Ligand clusters for UniProt code Q9CAJ0
Ligand clusters for Q9CAJ0: Protein phosphatase 2C 16 from Arabidopsis thaliana
Top 6 (of 11) ligand clusters
Cluster 1.
1 ligand type
1 ligand
Cluster 2.
3 ligand types
55 ligands
Cluster 3.
2 ligand types
6 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
2 ligand types
2 ligands
Representative protein: 3rt0A
Structures
PDB
Schematic diagram
3rt0
A
4lgb
B
4ds8
B
5jo2
B
3nmt
B
more ...
Cluster 1 contains 1 ligand type
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Ligand
Description
1. Ligand:
3UZ × 1
(2s)-2-(4-Chlorophenyl)-N-{2-[3-Methoxy-4-(Prop-2-Yn-1- Yloxy)phenyl]ethyl}-2-(Prop-2-Yn-1-
Yloxy)ethanamide
PDB code:
4wvo
(B).
Cluster 2 contains 3 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 39
PDB codes:
3kb3
(B),
3nmt
(B),
3rt0
(A),
3ujg
(B),
4la7
(B),
4lg5
(B),
4lga
(B),
4lgb
(B),
4wvo
(B),
5jo1
(B),
5jo2
(B),
5vr7
(B),
5vro
(B),
5vs5
(B),
5vsq
(B),
5vsr
(B),
5vt7
(B),
_Mn
2. Metal:
_MN × 11
PDB codes:
3qn1
(B),
3zvu
(B),
4ds8
(B),
5mn0
(B),
5or2
(B),
5or6
(B),
3. Ligand:
SO4 × 5
Sulfate ion
PDB codes:
3nmt
(B),
3ujg
(B),
3zvu
(B),
4lga
(B),
4lgb
(B).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
SO4 × 5
Sulfate ion
PDB codes:
3nmt
(B),
3ujg
(B),
3zvu
(B),
4lga
(B),
4lgb
(B).
_Cl
2. Metal:
_CL × 1
PDB code:
5mn0
(B).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4ds8
(B).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4la7
(B).
Cluster 6 contains 2 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 1
PDB code:
4la7
(B).
2. Ligand:
SO4 × 1
Sulfate ion
PDB code:
4lgb
(B).