Ligand clusters for UniProt code Q8DJZ6

Ligand clusters for Q8DJZ6: Photosystem II reaction center protein I from Thermosynechococcus elongatus (strain BP-1)

		2 ligand clusters Cluster 1. 11 ligand types 215 ligands Cluster 2. 1 ligand type 3 ligands
Representative protein: 1s5lI

Structures

PDB		Schematic diagram
1s5lI
5tisi
4ixqI
7nhpI
5e79I
		more ...

Cluster 1 contains 11 ligand types

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Ligand		Description
		1. Ligand: BCR × 52 beta carotene Beta-Carotene PDB codes: 2axt(I), 3bz1(I), 3bz2(I), 3kzi(I), 3prq(I), 3prr(I), 4fby(I), 4ixq(I), 4ixr(I), 4pbu(I), 4pj0(I), 4rvy(I), 4tnh(I), 4tni(I), 4tnj(I), 4tnk(I), 5e79(I), 5e7c(I), 5h2f(I), 5kaf(I), 5mx2(I), 5tis(I), 5zzn(I), 7nho(I).
		2. Ligand: DMS × 3 dimethyl sulfoxide Dimethyl sulfoxide PDB codes: 5h2f(I), 5zzn(I),
		3. Ligand: CLA × 65 Chlorophyll a PDB codes: 1s5l(I), 2axt(I), 3bz1(I), 3bz2(I), 3kzi(I), 3prq(I), 3prr(I), 4fby(I), 4ixq(I), 4ixr(I), 4pbu(I), 4pj0(I), 4rvy(I), 4tnh(I), 4tni(I), 4tnj(I), 4tnk(I), 5e79(I), 5e7c(I), 5h2f(I), 5kaf(I), 5kai(I), 5mx2(I), 5tis(I), 5zzn(I), 7nho(I), 7nhp(I), 7nhq(I),
		4. Ligand: LMT × 29 Dodecyl-Beta-D-Maltoside PDB codes: 3bz1(I), 3bz2(I), 3kzi(I), 3prq(I), 3prr(I), 4fby(I), 4ixq(I), 4ixr(I), 4tnh(I), 4tni(I), 4tnj(I), 4tnk(I), 5h2f(I), 5zzn(I),
		5. Ligand: LMG × 28 1,2-Distearoyl-Monogalactosyl-Diglyceride PDB codes: 3bz1(I), 3bz2(I), 3prq(I), 3prr(I), 4fby(I), 4ixq(I), 4ixr(I), 4pj0(I), 4rvy(I), 4tnh(I), 4tni(I), 4tnj(I), 4tnk(I), 5e79(I), 5e7c(I), 5h2f(I), 5kaf(I), 5kai(I), 5mx2(I), 5tis(I), 5zzn(I), 7nho(I), 7nhp(I), 7nhq(I).
		6. Ligand: UNL × 19 Unknown ligand PDB codes: 4pj0(I), 5h2f(i), 5kai(I), 5tis(I), 5zzn(I),
		7. Ligand: DGD × 12 Digalactosyl diacyl glycerol (dgdg) PDB codes: 3bz1(I), 3bz2(I), 3kzi(I), 3prq(I), 3prr(I), 4fby(I), 4ixq(I), 4ixr(I), 4tnh(I), 4tni(I), 4tnj(I), 4tnk(I).
		8. Ligand: SQD × 4 1,2-Di-O-Acyl-3-O-[6-Deoxy-6-Sulfo-Alpha-D- Glucopyranosyl]-Sn-Glycerol PDB codes: 4fby(I), 4ixr(I), 5kaf(I), 5kai(I).
		9. Ligand: LFA × 1 Eicosane PDB code: 5mx2(I).
		10. Ligand: MGE × 1 (1s)-2-(Alpha-L-Allopyranosyloxy)-1-[(Tridecanoyloxy) methyl]ethyl palmitate PDB code: 2axt(I).
		11. Ligand: UNK × 1 PDB code: 2axt(I).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: DMS × 3 dimethyl sulfoxide Dimethyl sulfoxide PDB codes: 5h2f(I), 5zzn(i).