PDBsum entry 4tnh

Electron transport,photosynthesis

PDB id: 4tnh

Contents

Protein chains

335 a.a.

490 a.a.

447 a.a.

340 a.a.

82 a.a.

35 a.a.

65 a.a.

35 a.a.

34 a.a.

37 a.a.

37 a.a.

34 a.a.

243 a.a.

32 a.a.

97 a.a.

137 a.a.

28 a.a.

37 a.a.

28 a.a.

62 a.a.

Ligands

CLA ×70

PL9 ×6

BCR ×24

DGD ×14

LHG ×4

LMG ×22

OEX ×2

SQD ×10

LMT ×14

PHO ×4

BCT

HEM

Metals

_CA

FE2

_CL ×2

PDB id:

4tnh

Name:

Electron transport,photosynthesis

Title:

Rt xfel structure of photosystem ii in the dark state at 4.9 a resolution

Structure:

Photosystem q(b) protein 1. Chain: a, a. Fragment: unp residues 1-344. Synonym: 32 kda thylakoid membrane protein 1,photosystem ii protein d1 1. Photosystem ii core light harvesting protein. Chain: b, b. Photosystem ii cp43 protein. Chain: c, c.

Source:

Thermosynechococcus elongatus. Organism_taxid: 197221. Strain: bp-1. Strain: bp-1

Resolution:

4.90Å R-factor: 0.281 R-free: 0.292

Authors:

J.Kern,R.Tran,R.Alonso-Mori,S.Koroidov,N.Echols,J.Hattne,M.Ibrahim, S.Gul,H.Laksmono,R.G.Sierra,R.J.Gildea,G.Han,J.Hellmich,B.Lassalle- Kaiser,R.Chatterjee,A.Brewster,C.A.Stan,C.Gloeckner,A.Lampe, D.Difiore,D.Milathianaki,A.R.Fry,M.M.Seibert,J.E.Koglin,E.Gallo, J.Uhlig,D.Sokaras,T.-C.Weng,P.H.Zwart,D.E.Skinner,M.J.Bogan, M.Messerschmidt,P.Glatzel,G.J.Williams,S.Boutet,P.D.Adams,A.Zouni, J.Messinger,N.K.Sauter,U.Bergmann,J.Yano,V.K.Yachandra

Date:

04-Jun-14 Release date: 09-Jul-14

Protein chains

P0A444  (PSBA1_THEEB) -  Photosystem II protein D1 1 from Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)

Seq: 360 a.a.

Struc: 335 a.a.

Protein chains

Q8DIQ1  (PSBB_THEEB) -  Photosystem II CP47 reaction center protein from Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)

Seq: 510 a.a.

Struc: 490 a.a.

Protein chains

Q8DIF8  (PSBC_THEEB) -  Photosystem II CP43 reaction center protein from Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)

Seq: 461 a.a.

Struc: 447 a.a.

Protein chains

Q8CM25  (PSBD_THEEB) -  Photosystem II D2 protein from Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)

Seq: 352 a.a.

Struc: 340 a.a.

Protein chains

Q8DIP0  (PSBE_THEEB) -  Cytochrome b559 subunit alpha from Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)

Seq: 84 a.a.

Struc: 82 a.a.

Protein chains

Q8DIN9  (PSBF_THEEB) -  Cytochrome b559 subunit beta from Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)

Seq: 45 a.a.

Struc: 35 a.a.

Protein chains

Q8DJ43  (PSBH_THEEB) -  Photosystem II reaction center protein H from Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)

Seq: 66 a.a.

Struc: 65 a.a.

Protein chains

Q8DJZ6  (PSBI_THEEB) -  Photosystem II reaction center protein I from Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)

Seq: 38 a.a.

Struc: 35 a.a.

Protein chains

P59087  (PSBJ_THEEB) -  Photosystem II reaction center protein J from Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)

Seq: 40 a.a.

Struc: 34 a.a.

Protein chains

Q9F1K9  (PSBK_THEEB) -  Photosystem II reaction center protein K from Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)

Seq: 46 a.a.

Struc: 37 a.a.

Protein chains

Q8DIN8  (PSBL_THEEB) -  Photosystem II reaction center protein L from Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)

Seq: 37 a.a.

Struc: 37 a.a.

Protein chains

Q8DHA7  (PSBM_THEEB) -  Photosystem II reaction center protein M from Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)

Seq: 36 a.a.

Struc: 34 a.a.

Protein chains

P0A431  (PSBO_THEEB) -  Photosystem II extrinsic protein O from Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)

Seq: 272 a.a.

Struc: 243 a.a.

Protein chains

Q8DIQ0  (PSBT_THEEB) -  Photosystem II reaction center protein T from Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)

Seq: 32 a.a.

Struc: 32 a.a.

Protein chains

Q9F1L5  (PSBU_THEEB) -  Photosystem II extrinsic protein U from Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)

Seq: 134 a.a.

Struc: 97 a.a.

Protein chains

P0A386  (CY550_THEEB) -  Photosystem II extrinsic protein V from Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)

Seq: 163 a.a.

Struc: 137 a.a.

Protein chains

Q8DJI1  (YCF12_THEEB) -  Photosystem II reaction center protein Psb30 from Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)

Seq: 46 a.a.

Struc: 28 a.a.

Protein chains

Q9F1R6  (PSBX_THEEB) -  Photosystem II reaction center protein X from Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)

Seq: 41 a.a.

Struc: 37 a.a.

Protein chains

No UniProt id for this chain

Struc: 28 a.a.

Protein chains

Q8DHJ2  (PSBZ_THEEB) -  Photosystem II reaction center protein Z from Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)

Seq: 62 a.a.

Struc: 62 a.a.

Enzyme reactions

• Enzyme class: Chains A, D, a, d: E.C.1.10.3.9 - photosystem Ii.
• Reaction: 2 a plastoquinone + 4 hnu + 2 H2O = 2 a plastoquinol + O2

Molecule diagrams generated from .mol files obtained from the KEGG ftp site