Ligand clusters for UniProt code Q8DIP0

Ligand clusters for Q8DIP0: Cytochrome b559 subunit alpha from Thermosynechococcus elongatus (strain BP-1)

		5 ligand clusters Cluster 1. 6 ligand types 56 ligands Cluster 2. 3 ligand types 34 ligands Cluster 3. 1 ligand type 2 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand
Representative protein: 2axtE

Structures

PDB		Schematic diagram
2axtE
5tisE
4rvyE
4pbuE
4pj0E
		more ...

Cluster 1 contains 6 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file. Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: HEM × 30 Protoporphyrin IX containing fe PDB codes: 1izl(E), 1w5c(E), 2axt(E), 3bz1(E), 3bz2(E), 3kzi(E), 3prq(E), 3prr(E), 4fby(E), 4ixq(E), 4ixr(E), 4pbu(E), 4pj0(E), 4rvy(E), 4tnh(E), 4tni(E), 4tnj(E), 4tnk(E), 5e79(E), 5e7c(E), 5h2f(E), 5kaf(E), 5kai(E), 5mx2(E), 5tis(E), 5zzn(E), 7nho(E), 7nhp(E), 7nhq(E).
		2. Ligand: LMG × 11 1,2-Distearoyl-Monogalactosyl-Diglyceride PDB codes: 3bz1(E), 3bz2(E), 3prq(E), 3prr(E), 4fby(E), 4ixq(E), 4ixr(E), 4tnh(E), 4tni(E), 4tnj(E), 4tnk(E).
		3. Ligand: LHG × 10 1,2-Dipalmitoyl-Phosphatidyl-Glycerole PDB codes: 4pbu(E), 4pj0(E), 4rvy(E), 5e79(E), 5e7c(E), 5kaf(E), 5kai(E), 5mx2(E), 5tis(E), 5zzn(E).
		4. Ligand: LMT × 2 Dodecyl-Beta-D-Maltoside PDB codes: 5h2f(E), 5zzn(E).
		5. Ligand: UNL × 2 Unknown ligand PDB codes: 5tis(E), 5zzn(E).
		6. Ligand: HEC × 1 Heme c PDB code: 1s5l(E).

Cluster 2 contains 3 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: DGD × 18 Digalactosyl diacyl glycerol (dgdg) PDB codes: 3bz1(E), 3bz2(E), 3kzi(E), 3prq(E), 3prr(E), 4fby(E), 4ixq(E), 4ixr(E), 4pbu(E), 4rvy(E), 4tnh(E), 4tni(E), 4tnj(E), 4tnk(E), 5e79(E), 5e7c(E), 5h2f(E), 5zzn(E).
		2. Ligand: SQD × 15 1,2-Di-O-Acyl-3-O-[6-Deoxy-6-Sulfo-Alpha-D- Glucopyranosyl]-Sn-Glycerol PDB codes: 3bz1(E), 3bz2(E), 3prq(E), 3prr(E), 4fby(E), 4ixq(E), 4ixr(E), 4tnh(E), 4tni(E), 4tnj(E), 4tnk(E), 5e7c(E), 5h2f(E), 5kaf(E), 5kai(E).
		3. Ligand: LHG × 1 1,2-Dipalmitoyl-Phosphatidyl-Glycerole PDB code: 5zzn(E).

Cluster 3 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: DMS × 2 dimethyl sulfoxide Dimethyl sulfoxide PDB codes: 5h2f(E), 5zzn(E).

Cluster 4 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: DMS × 1 dimethyl sulfoxide Dimethyl sulfoxide PDB code: 5zzn(E).

Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: DMS × 1 dimethyl sulfoxide Dimethyl sulfoxide PDB code: 5zzn(E).