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Ligand clusters for UniProt code Q8DHA7

Ligand clusters for Q8DHA7: Photosystem II reaction center protein M from Thermosynechococcus elongatus (strain BP-1)

1 ligand cluster


Cluster 1. 12 ligand types 255 ligands

Representative protein: 2axtM

Structures

PDB		Schematic diagram

2axtM
5tisM
5e79M
5zznM
5kafM
		more ...

Cluster 1 contains 12 ligand types

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Ligand

Description

1. Ligand: BCR × 24

beta carotene

Beta-Carotene

PDB codes: 1s5l(M), 2axt(M), 3bz1(M), 3bz2(M), 3kzi(M), 3prq(M), 3prr(M), 4fby(M), 4ixq(M), 4ixr(M), 4pj0(M), 4rvy(M), 4tnh(M), 4tni(M), 4tnj(M), 4tnk(M), 5e79(M), 5e7c(M), 5kaf(M), 5kai(M), 5mx2(M), 5tis(M), 5zzn(M),

2. Ligand: DMS × 2

dimethyl sulfoxide

Dimethyl sulfoxide

PDB codes: 5zzn(M),

3. Ligand: CLA × 70

Chlorophyll a

PDB codes: 1s5l(M), 2axt(M), 3bz1(M), 3bz2(M), 3kzi(M), 3prq(M), 3prr(M), 4fby(M), 4ixq(M), 4ixr(M), 4pbu(M), 4pj0(M), 4rvy(M), 4tnh(M), 4tni(M), 4tnj(M), 4tnk(M), 5e79(M), 5e7c(M), 5kaf(M), 5kai(M), 5mx2(M), 5tis(M), 5zzn(M), 7nho(M), 7nhp(M), 7nhq(M),

4. Ligand: LMG × 66

1,2-Distearoyl-Monogalactosyl-Diglyceride

PDB codes: 3bz1(M), 3bz2(M), 3kzi(M), 3prq(M), 3prr(M), 4fby(M), 4ixq(M), 4ixr(M), 4pj0(M), 4rvy(M), 4tnh(M), 4tni(M), 4tnj(M), 4tnk(M), 5e79(M), 5e7c(M), 5kaf(M), 5kai(M), 5mx2(M), 5tis(M), 5zzn(M), 7nho(M), 7nhp(M), 7nhq(M).

5. Ligand: LMT × 32

Dodecyl-Beta-D-Maltoside

PDB codes: 2axt(M), 3bz1(M), 3bz2(M), 3kzi(M), 3prq(M), 3prr(M), 4fby(M), 4ixq(M), 4ixr(M), 4tnh(M), 4tni(M), 4tnj(M), 4tnk(M), 5zzn(M),

6. Ligand: SQD × 20

1,2-Di-O-Acyl-3-O-[6-Deoxy-6-Sulfo-Alpha-D- Glucopyranosyl]-Sn-Glycerol

PDB codes: 3bz1(M), 3bz2(M), 3prq(M), 3prr(M), 4fby(M), 4ixq(M), 4ixr(M), 4pbu(M), 4pj0(M), 4rvy(M), 4tnh(M), 4tni(M), 4tnj(M), 4tnk(M), 5e79(M), 5kaf(M), 5kai(M), 5mx2(M), 5tis(M).