Ligand clusters for UniProt code Q89ZX7

Ligand clusters for Q89ZX7: Peptidase M60 domain-containing protein from Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)

		6 ligand clusters Cluster 1. 3 ligand types 6 ligands Cluster 2. 1 ligand type 1 ligand Cluster 3. 1 ligand type 2 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 5kd2A

Structures

PDB		Schematic diagram
5kd2A
5kd5A
5kd8A

Cluster 1 contains 3 ligand types

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Ligand		Description
_Zn		1. Metal: _ZN × 3 PDB codes: 5kd2(A), 5kd5(A), 5kd8(A).
		2. Ligand: EDO × 2 1,2-Ethanediol PDB codes: 5kd2(A), 5kd5(A).
		3. Ligand: SER-A2G × 1 A2G=2-Acetamido-2-Deoxy-Alpha-D-Galactopyranose. PDB code: 5kd8(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: PO4 × 1 Phosphate ion PDB code: 5kd5(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: EDO × 2 1,2-Ethanediol PDB codes: 5kd2(A),

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: EDO × 1 1,2-Ethanediol PDB code: 5kd2(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: EDO × 1 1,2-Ethanediol PDB code: 5kd5(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: EDO × 1 1,2-Ethanediol PDB code: 5kd5(A).