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PDBsum entry 5kd8
Go to PDB code:
Hydrolase
PDB id
5kd8
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Contents
Protein chain
537 a.a.
Ligands
SER-A2G
Metals
_ZN
_NI
×2
_NA
×2
Waters
×155
PDB id:
5kd8
Links
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ProSAT
Name:
Hydrolase
Title:
Bt_4244 metallopeptidase in complex with tn antigen.
Structure:
Metallopeptidase. Chain: a. Fragment: unp residues 322-857. Engineered: yes. Other_details: in complex with tn antigen
Source:
Bacteroides thetaiotaomicron (strain atcc 29148 / dsm 2079 / nctc 10582 / e50 / vpi-5482). Organism_taxid: 226186. Strain: atcc 29148 / dsm 2079 / nctc 10582 / e50 / vpi-5482. Gene: bt_4244. Expressed in: escherichia coli 'bl21-gold(de3)plyss ag'. Expression_system_taxid: 866768
Resolution:
2.30Å
R-factor:
0.202
R-free:
0.242
Authors:
I.Noach,A.B.Boraston
Key ref:
I.Noach et al. (2017). Recognition of protein-linked glycans as a determinant of peptidase activity.
Proc Natl Acad Sci U S A
,
114
, E679.
PubMed id:
28096352
DOI:
10.1073/pnas.1615141114
Date:
07-Jun-16
Release date:
11-Jan-17
PROCHECK
Headers
References
Protein chain
?
Q89ZX7
(Q89ZX7_BACTN) - Peptidase M60 domain-containing protein from Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50)
Seq:
Struc:
Seq:
Struc:
857 a.a.
537 a.a.
*
Key:
PfamA domain
Secondary structure
*
PDB and UniProt seqs differ at 1 residue position (black cross)
DOI no:
10.1073/pnas.1615141114
Proc Natl Acad Sci U S A
114
:E679 (2017)
PubMed id:
28096352
Recognition of protein-linked glycans as a determinant of peptidase activity.
I.Noach,
E.Ficko-Blean,
B.Pluvinage,
C.Stuart,
M.L.Jenkins,
D.Brochu,
N.Buenbrazo,
W.Wakarchuk,
J.E.Burke,
M.Gilbert,
A.B.Boraston.
ABSTRACT
No abstract given.
Links
