Ligand clusters for UniProt code Q837V6

Ligand clusters for Q837V6: DNA ligase from Enterococcus faecalis (strain ATCC 700802 / V583)

		Top 6 (of 13) ligand clusters Cluster 1. 12 ligand types 23 ligands Cluster 2. 1 ligand type 10 ligands Cluster 3. 1 ligand type 2 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 9 ligands Cluster 6. 1 ligand type 5 ligands
Representative protein: 4lh6A

Structures

PDB		Schematic diagram
4lh6A
4lh7A
3baaA
3ba8A
1ta8A
		more ...

Cluster 1 contains 12 ligand types

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Ligand		Description
		1. Ligand: NAD × 1 Nicotinamide-Adenine-Dinucleotide PDB code: 1tae(A).
		2. Ligand: GOL × 4 glycerin Glycerol PDB codes: 1ta8(A), 3ba9(A), 3baa(A).
		3. Ligand: SO4 × 9 Sulfate ion PDB codes: 1ta8(A), 1tae(A), 3ba8(A), 3ba9(A), 3baa(A), 4eeq(A), 4efb(A), 4efe(A).
		4. Ligand: 0OV × 1 [4-Amino-2-{[(1s,2r)-2-Methylcyclohexyl]oxy}-5- Oxopyrido[2,3-D]pyrimidin-8(5h)-Yl]acetonitrile PDB code: 4efe(A).
		5. Ligand: 0OW × 1 4-Amino-2-(Cyclopentyloxy)-6-{[(1r,2s)-2- Hydroxycyclopentyl]oxy}pyrimidine-5-Carboxamide PDB code: 4efb(A).
		6. Ligand: 0OX × 1 4-Amino-2-(Cyclopentyloxy)pyrimidine-5-Carboxamide PDB code: 4eeq(A).
		7. Ligand: 1X7 × 1 4-Amino-2-Bromothieno[3,2-C]pyridine-7-Carboxamide PDB code: 4lh6(A).
		8. Ligand: 1X8 × 1 4-Aminothieno[3,2-C]pyridine-2,7-Dicarboxamide PDB code: 4lh7(A).
		9. Ligand: 3B8 × 1 2-Amino-7-Fluoro-5-Oxo-5h-Chromeno[2,3-B]pyridine-3- Carboxamide PDB code: 3ba8(A).
		10. Ligand: 3B9 × 1 N-[2-(2,4-Diaminopyrido[2,3-D]pyrimidin-7-Yl)-2- Methylpropyl]-4-Phenoxybenzamide PDB code: 3ba9(A).
		11. Ligand: 3BA × 1 7-Amino-2-Tert-Butyl-4-{[2-(1h-Imidazol-4-Yl) ethyl]amino}pyrido[2,3-D]pyrimidine-6-Carboxamide PDB code: 3baa(A).
		12. Ligand: 3BD × 1 7-Amino-2-Tert-Butyl-4-(4-Pyrimidin-2-Ylpiperazin-1- Yl)pyrido[2,3-D]pyrimidine-6-Carboxamide PDB code: 3bab(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: NMN × 10 Beta-Nicotinamide ribose monophosphate PDB codes: 1ta8(A), 3ba8(A), 3ba9(A), 3baa(A), 3bab(A), 4eeq(A), 4efb(A), 4efe(A), 4lh6(A), 4lh7(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 2 glycerin Glycerol PDB codes: 3ba9(A), 3baa(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3bab(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 9 Sulfate ion PDB codes: 1ta8(A), 1tae(A), 3ba8(A), 3ba9(A), 3baa(A), 3bab(A), 4eeq(A), 4efb(A), 4efe(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 5 Sulfate ion PDB codes: 1tae(A), 3ba8(A), 3ba9(A), 3baa(A), 3bab(A).