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Ligand clusters for UniProt code Q4W1X2

Ligand clusters for Q4W1X2: UDP-galactopyranose mutase from Neosartorya fumigata

Top 6 (of 23) ligand clusters
Cluster 1.
10 ligand types
62 ligands
Cluster 2.
1 ligand type
3 ligands
Cluster 3.
2 ligand types
9 ligands
Cluster 4.
2 ligand types
7 ligands
Cluster 5.
2 ligand types
3 ligands
Cluster 6.
1 ligand type
17 ligands
Representative protein: 3ukkA  
JSmol
 

Structures

PDB   Schematic diagram
3ukkA    
3ukfA    
3uklA    
3ukpA    
3utgA    
 more ...

 

 Cluster 1 contains 10 ligand types

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Ligand Description


 
1. Ligand: FAD × 10
flavin adenine dinucleotide
Flavin-Adenine dinucleotide
PDB codes: 3uka(A), 3ukh(A), 3ukl(A), 3ukp(A), 3ukq(A), 3ute(A), 4gdc(A), 4gdd(A), 5vwt(A), 5vwu(A).


 
2. Ligand: NAI × 2
nadh
1,4-Dihydronicotinamide adenine dinucleotide
PDB codes: 4gdd(A), 5vwu(A).


 
3. Ligand: FDA × 15
Dihydroflavine-Adenine dinucleotide
PDB codes: 3ukf(A), 3ukk(A), 3utf(A), 3utg(A), 3uth(A), 4gde(A), 4u8i(A), 4u8j(A), 4u8k(A), 4u8l(A), 4u8m(A), 4u8n(A), 4u8o(A), 4u8p(A), 4wx1(A).


 
4. Ligand: SO4 × 10
Sulfate ion
PDB codes: 3ute(A), 4gdc(A), 4gdd(A), 4u8i(A), 4u8k(A), 4u8l(A), 4u8m(A), 5vwt(A), 5vwu(A).


 
5. Ligand: EDO × 8
1,2-Ethanediol
PDB codes: 4u8j(A), 4u8k(A), 4u8m(A), 4u8n(A), 4u8p(A),


 
6. Ligand: UDP × 8
Uridine-5'-Diphosphate
PDB codes: 3ukk(A), 3ukl(A), 3utg(A), 4u8n(A), 4u8o(A), 4u8p(A), 4wx1(A), 5hhf(A).


 
7. Ligand: GDU × 5
Galactose-Uridine-5'-Diphosphate
PDB codes: 3ukf(A), 3ukh(A), 3ukp(A), 3ukq(A), 3uth(A).


 
8. Ligand: NDP × 2
Nadph dihydro-Nicotinamide-Adenine-Dinucleotide phosphate
PDB codes: 4gdc(A), 5vwt(A).


 
9. Ligand: 62F × 1
[[(2~{r},3~{s},4~{r},5~{r})-5-(6-Aminopurin-9-Yl)-3,4- Bis(oxidanyl)oxolan-2-Yl]methoxy-Oxidanyl-
Phosphoryl] [(2~{r},3~{s},4~{s})-5-[5-[(2~{r},3~{r},4~{s},5~{r}, 6~{r})-6-(Hydroxymethyl)-3,4,5-
Tris(oxidanyl)oxan-2- Yl]-7,8-Dimethyl-2,4-Bis(oxidanyl)benzo[g]pteridin-10- Yl]-2,3,4-
Tris(oxidanyl)pentyl] hydrogen phosphate
PDB code: 5hhf(A).

_Cl
 
10. Metal: _CL × 1
PDB code: 3ukh(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: UDP × 3
Uridine-5'-Diphosphate
PDB codes: 4u8n(A), 4u8o(A), 4u8p(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: EDO × 8
1,2-Ethanediol
PDB codes: 4u8i(A), 4u8j(A), 4u8k(A), 4u8l(A), 4u8m(A), 4u8n(A), 4u8o(A), 4u8p(A).


 
2. Ligand: MRY × 1
Meso-Erythritol
PDB code: 5hhf(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: SO4 × 6
Sulfate ion
PDB codes: 3ute(A), 4gdc(A), 4gdd(A), 4u8o(A), 5vwt(A), 5vwu(A).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 4u8i(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 3utf(A), 4u8p(A).

_Cl
 
2. Metal: _CL × 1
PDB code: 3ukl(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 17
Sulfate ion
PDB codes: 3ute(A), 3utf(A), 3utg(A), 3uth(A), 4gdc(A), 4gde(A), 4u8i(A), 4u8j(A), 4u8k(A), 4u8l(A), 4u8m(A), 4u8n(A), 4u8o(A), 4u8p(A), 4wx1(A), 5hhf(A), 5vwt(A).

 

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