Ligand clusters for UniProt code Q38C91

Ligand clusters for Q38C91: Methionyl-tRNA synthetase, putative from Trypanosoma brucei brucei (strain 927/4 GUTat10.1)

		Top 6 (of 24) ligand clusters Cluster 1. 3 ligand types 42 ligands Cluster 2. 3 ligand types 22 ligands Cluster 3. 2 ligand types 22 ligands Cluster 4. 2 ligand types 74 ligands Cluster 5. 1 ligand type 10 ligands Cluster 6. 1 ligand type 28 ligands
Representative protein: 4eg7A

Structures

PDB		Schematic diagram
4eg7A
4mw1A
4mwdA
4zt6A
4mvyA
		more ...

Cluster 1 contains 3 ligand types

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Ligand		Description
		1. Ligand: MET × 36 methionine PDB codes: 4eg1(A), 4eg4(A), 4eg5(A), 4eg6(A), 4eg7(A), 4eg8(A), 4ega(A), 4mvw(A), 4mvx(A), 4mvy(A), 4mw0(A), 4mw1(A), 4mw2(A), 4mw4(A), 4mw5(A), 4mw6(A), 4mw7(A), 4mw9(A), 4mwb(A), 4mwc(A), 4mwd(A), 4mwe(A), 4zt2(A), 4zt3(A), 4zt4(A), 4zt5(A), 4zt6(A), 4zt7(A), 5j58(A), 5j59(A), 5j5a(A), 5nfh(A), 5tqu(A), 5v49(A), 6cml(A), 6mes(A).
		2. Ligand: GOL × 5 glycerin Glycerol PDB codes: 4eg4(A), 4eg5(A), 4eg6(A), 4ega(A), 4mw7(A).
		3. Ligand: ME8 × 1 [[(2r,3s,4r,5r)-5-(6-Aminopurin-9-Yl)-3,4-Dihydroxy- Oxolan-2-Yl]methoxy-Hydroxy-Phosphoryl] (2s)- 2-Azanyl- 4-Methylsulfanyl-Butanoate PDB code: 4eg3(A).

Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: GOL × 13 glycerin Glycerol PDB codes: 4eg1(A), 4eg3(A), 4eg4(A), 4eg5(A), 4eg6(A), 4eg8(A), 4ega(A), 4mvw(A), 4mw1(A), 4mw5(A), 4mw6(A), 4mw7(A), 4mwb(A).
		2. Ligand: DMS × 3 dimethyl sulfoxide Dimethyl sulfoxide PDB codes: 4eg7(A), 4zt2(A), 4zt3(A).
		3. Ligand: SO4 × 6 Sulfate ion PDB codes: 4mw2(A), 4mw4(A), 4mw9(A), 4mwc(A), 4mwd(A), 4mwe(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 16 glycerin Glycerol PDB codes: 4eg3(A), 4eg4(A), 4eg5(A), 4eg6(A), 4eg7(A), 4eg8(A), 4ega(A), 4mvx(A), 4mvy(A), 4mw2(A), 4mw4(A), 4mw7(A), 4mw9(A), 4mwb(A), 4mwc(A), 4mwd(A).
		2. Ligand: DMS × 6 dimethyl sulfoxide Dimethyl sulfoxide PDB codes: 4zt2(A), 4zt3(A), 4zt4(A), 4zt5(A), 4zt6(A), 4zt7(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: DMS × 73 dimethyl sulfoxide Dimethyl sulfoxide PDB codes: 4eg4(A), 4eg5(A), 4eg6(A), 4eg7(A), 4eg8(A), 4ega(A), 4mvw(A), 4mvx(A), 4mvy(A), 4mw0(A), 4mw1(A), 4mw2(A), 4mw4(A), 4mw5(A), 4mw6(A), 4mw7(A), 4mw9(A), 4mwb(A), 4mwc(A), 4mwd(A), 4mwe(A), 4zt2(A), 4zt3(A), 4zt4(A), 4zt5(A), 4zt6(A), 4zt7(A), 5j58(A), 5nfh(A),
		2. Ligand: GOL × 1 glycerin Glycerol PDB code: 4eg3(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 10 glycerin Glycerol PDB codes: 4eg1(A), 4eg5(A), 4eg8(A), 4mvy(A), 4mw1(A), 4mw2(A), 4mw6(A), 4mwb(A), 4mwc(A), 4mwd(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 28 glycerin Glycerol PDB codes: 4eg1(A), 4eg3(A), 4eg4(A), 4eg5(A), 4eg6(A), 4eg7(A), 4eg8(A), 4ega(A), 4mvw(A), 4mvx(A), 4mvy(A), 4mw0(A), 4mw1(A), 4mw2(A), 4mw4(A), 4mw5(A), 4mw6(A), 4mw7(A), 4mw9(A), 4mwb(A), 4mwc(A), 4mwd(A), 4mwe(A), 4zt2(A), 4zt3(A), 4zt5(A), 5j58(A), 5nfh(A).